RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KIR2DS3Q14952 304 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 GPR68Q15743 365 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 HACD4Q5VWC8 232 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 OR4M1Q8NGD0 313 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 SLC2A12Q8TD20 617 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ASB12Q8WXK4 309 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 PLA2G2FQ9BZM2 168 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 EVA1AQ9H8M9 152 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 LYRM4Q9HD34 91 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 TRPV5Q9NQA5 729 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ENAMQ9NRM1 1142 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 TMEM74BQ9NUR3 256 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 WDR70Q9NW82 654 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 PILRAQ9UKJ1 303 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 SLC35A3Q9Y2D2 325 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ATG2AQ2TAZ0 1938 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 FAM86C2PA6NEL3 165 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 E9PI62 339 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 B3GALT2O43825 422 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 CTSVO60911 334 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF780AO75290 641 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-209ENST00000470026 AK1P00568 194 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 EIF4EP06730 217 aaKnown RBP12.65□□□□□ -0.38
BRCA1-209ENST00000470026 SBK2P0C263 348 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 KIR2DL1P43626 348 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ATP12AP54707 1039 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ADPRHP54922 357 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 RAB25P57735 213 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ZNF85Q03923 595 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 CSTF1Q05048 431 aaKnown RBP12.65□□□□□ -0.38
BRCA1-209ENST00000470026 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 SYCE2Q6PIF2 218 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 OR4N5Q8IXE1 308 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 CDRT4Q8N9R6 151 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 OR14C36Q8NHC7 312 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 HOXB13Q92826 284 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-209ENST00000470026 WACQ9BTA9 647 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 NDC1Q9BTX1 674 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 ADGRL4Q9HBW9 690 aa12.65□□□□□ -0.38
BRCA1-209ENST00000470026 GOLGA4Q13439 2230 aaKnown RBP12.65□□□□□ -0.39
BRCA1-209ENST00000470026 URADA6NGE7 173 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 LANCL1O43813 399 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 GKN3PP0CG01 181 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PRR23D2P0DMB1 279 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 BTCP35070 178 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 AMZ1Q400G9 498 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 DEFB134Q4QY38 66 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 FCRL6Q6DN72 434 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 DMKNQ6E0U4 476 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 LAMTOR1Q6IAA8 161 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF613Q6PF04 617 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 SLC43A2Q8N370 569 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 ABHD4Q8TB40 342 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 AKAP1Q92667 903 aaKnown RBP eCLIP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 RFT1Q96AA3 541 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 BPIFA2Q96DR5 249 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 THAP7Q9BT49 309 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF426Q9BUY5 554 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MKRN2Q9H000 416 aaKnown RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 SRMSQ9H3Y6 488 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 SLC28A3Q9HAS3 691 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MEPEQ9NQ76 525 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 RPRD1BQ9NQG5 326 aaKnown RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 POLE3Q9NRF9 147 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 C14orf105Q9NVL8 296 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 FBXO34Q9NWN3 711 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MCUBQ9NWR8 336 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 FBXL21Q9UKT6 434 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 BAIAP2Q9UQB8 552 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 A6NCN8 305 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PEX12O00623 359 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 SCAMP1O15126 338 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PAHP00439 452 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PTNP21246 168 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 AHCYP23526 432 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 PITPNBP48739 271 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 INPP1P49441 399 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 E2F1Q01094 437 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MGAT2Q10469 447 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MAB21L1Q13394 359 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 CLPPQ16740 277 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF57Q68EA5 555 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-209ENST00000470026 BICRALQ6AI39 1079 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 OR10H4Q8NGA5 316 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 OR13C2Q8NGS9 318 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 OR1E3Q8WZA6 343 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 TBX5Q99593 518 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 ZCCHC4Q9H5U6 513 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 ERVMER34-1Q9H9K5 563 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 RASD1Q9Y272 281 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 MED31Q9Y3C7 131 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
BRCA1-209ENST00000470026 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms