RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SLC46A3Q7Z3Q1 461 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 BPHLQ86WA6 291 aaPredicted RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 PLPP5Q8NEB5 264 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 KBTBD8Q8NFY9 601 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 GRHL3Q8TE85 626 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 FGF11Q92914 225 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 LRFN5Q96NI6 719 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 SLC19A3Q9BZV2 496 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 OR52D1Q9H346 318 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 FN3KQ9H479 309 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 MRPS18AQ9NVS2 196 aaKnown RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 SIDT1Q9NXL6 827 aaKnown RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ATXN7L1Q9ULK2 861 aaPredicted RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 IGHV5-10-1A0A0J9YXX1 117 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 EFCAB9A8MZ26 197 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 SURF4O15260 269 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 CLPXO76031 633 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 IGF2P01344 180 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 NGFRP08138 427 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 BMP7P18075 431 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 MYL12AP19105 171 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 IL12BP29460 328 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 ACAA2P42765 397 aaKnown RBP12.13□□□□□ -0.47
CPSF4-206ENST00000441580 EFNB1P98172 346 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 AQP6Q13520 282 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
CPSF4-206ENST00000441580 TRA2AQ13595 282 aaKnown RBP eCLIP12.13□□□□□ -0.47
CPSF4-206ENST00000441580 NSDHLQ15738 373 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 FNDC7Q5VTL7 733 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 C1orf189Q5VU69 101 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 ACSM5Q6NUN0 579 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 SLC30A6Q6NXT4 461 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 SLC23A3Q6PIS1 610 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 SLC34A3Q8N130 599 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 EID2Q8N6I1 236 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 DTWD2Q8NBA8 298 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 OR1N1Q8NGS0 311 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 PFN4Q8NHR9 129 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 BPIFA2Q96DR5 249 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 GAL3ST4Q96RP7 486 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 DPH1Q9BZG8 443 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 NXF5Q9H1B4 397 aaKnown RBP12.13□□□□□ -0.47
CPSF4-206ENST00000441580 FLRT3Q9NZU0 649 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 CTSFQ9UBX1 484 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 MKL2Q9ULH7 1088 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 EXOSC1Q9Y3B2 195 aaKnown RBP12.13□□□□□ -0.47
CPSF4-206ENST00000441580 GON4LQ3T8J9 2241 aa12.13□□□□□ -0.47
CPSF4-206ENST00000441580 UNC80Q8N2C7 3258 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 C2orf92A0A1B0GVN3 265 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 FAM86C2PA6NEL3 165 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 OR2W5A6NFC9 320 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 D6RAR5 112 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 M0R082 166 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ARHGAP33O14559 1287 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 CDC42EP2O14613 210 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 PPM1BO75688 479 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SCRG1O75711 98 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ONECUT2O95948 504 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SAGP10523 405 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 TBXA2RP21731 343 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SLC6A6P31641 620 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SLC6A8P48029 635 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SLC9A3P48764 834 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 CLK1P49759 484 aaKnown RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 CDH11P55287 796 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SPCS2Q15005 226 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF528Q3MIS6 628 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 TRIM61Q5EBN2 209 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ARMCX4Q5H9R4 360 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 CLEC12AQ5QGZ9 265 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 PRAMEF17Q5VTA0 474 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 NXNL2Q5VZ03 156 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 WBP2NLQ6ICG8 309 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ARHGAP11AQ6P4F7 1023 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 SMARCD3Q6STE5 483 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 KIRREL2Q6UWL6 708 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ZNF574Q6ZN55 896 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 TMPRSS9Q7Z410 1059 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 MEX3DQ86XN8 651 aaKnown RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 CADM2Q8N3J6 435 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ZSCAN1Q8NBB4 408 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ANKK1Q8NFD2 765 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 PROKR2Q8NFJ6 384 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 OR9Q1Q8NGQ5 310 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 ADIPOR1Q96A54 375 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 EFHD2Q96C19 240 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 OR6C1Q96RD1 312 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 WWTR1Q9GZV5 400 aa12.12□□□□□ -0.47
CPSF4-206ENST00000441580 FGF20Q9NP95 211 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-206ENST00000441580 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms