RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 DDIT4LQ96D03 193 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 MPP4Q96JB8 637 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 MESP1Q9BRJ9 268 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 FANCFQ9NPI8 374 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 LUZP4Q9P127 313 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 NPIPA1Q9UND3 350 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 MED31Q9Y3C7 131 aa7.46□□□□□ -1.21
HMGCR-202ENST00000343975 VCANP13611 3396 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ANKRD33BA6NCL7 494 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 H0Y3Z8 333 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 hCG_2039718K7EN88 272 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ERVH48-1M5A8F1 160 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SEC14L5O43304 696 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 KRT36O76013 467 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 GADD45GO95257 159 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 PSMG1O95456 288 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 GUSBP08236 651 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 KCNJ5P48544 419 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 TNFSF10P50591 281 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SESN3P58005 492 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 KPNB1Q14974 876 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 RNF220Q5VTB9 566 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ULK3Q6PHR2 472 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 C5orf46Q6UWT4 87 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 MDGA2Q7Z553 956 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 UBQLNLQ8IYU4 475 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 CATSPER1Q8NEC5 780 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 OR2M7Q8NG81 312 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SLC25A43Q8WUT9 341 aaPredicted RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 NODALQ96S42 347 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 QPCTLQ9NXS2 382 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 C2orf72A6NCS6 295 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 H3BML4 177 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 TNFRSF11BO00300 401 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 PRRG2O14669 202 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 AKAP8O43823 692 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SRD5A2P31213 254 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 CPOXP36551 454 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 UGT2B15P54855 530 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 QPRTQ15274 297 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 GRINAQ7Z429 371 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 PTOV1Q86YD1 416 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ZDHHC13Q8IUH4 622 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 FAM109AQ8N4B1 249 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 FBXO27Q8NI29 283 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 CNOT9Q92600 299 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SLC35B4Q969S0 331 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ZBTB8AQ96BR9 441 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 TMEM41AQ96HV5 264 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 SMAD5Q99717 465 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 NAA11Q9BSU3 229 aaPredicted RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ASPNQ9BXN1 380 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ANGPTL4Q9BY76 406 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 PRRG3Q9BZD7 231 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 POLR2J2Q9GZM3 115 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 POLR2J3Q9H1A7 115 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 MAGIXQ9H6Y5 334 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 GALNT9Q9HCQ5 603 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 DCAF13Q9NV06 445 aaKnown RBP7.46□□□□□ -1.22
HMGCR-202ENST00000343975 TMEM5Q9Y2B1 443 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ENPP4Q9Y6X5 453 aa7.46□□□□□ -1.22
HMGCR-202ENST00000343975 ANKUB1A6NFN9 424 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 M0R3H8 397 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 SNPHO15079 494 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 OR2T1O43869 369 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 SAGP10523 405 aaPredicted RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 PEPDP12955 493 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 BMP7P18075 431 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 RHCEP18577 417 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 PTPN6P29350 595 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 YAP1P46937 504 aaKnown RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 POLR2HP52434 150 aaKnown RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 CDH12P55289 794 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 Q0VFX4 171 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 NFATC3Q12968 1075 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 ZNF791Q3KP31 576 aaPredicted RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 GTF2IRD2BQ6EKJ0 949 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 H3F3CQ6NXT2 135 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 ZNF836Q6ZNA1 936 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 OLIG3Q7RTU3 272 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 GTF2IRD2Q86UP8 949 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 CALHM3Q86XJ0 350 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 PTRH1Q86Y79 214 aaKnown RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 EGFL6Q8IUX8 553 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 ZNF441Q8N8Z8 693 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 PNPLA2Q96AD5 504 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 EME1Q96AY2 570 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 PLEKHA8Q96JA3 519 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 CHID1Q9BWS9 393 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 DEFB127Q9H1M4 99 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 SLC52A3Q9NQ40 469 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 ZNF223Q9UK11 482 aaPredicted RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 MCTS1Q9ULC4 181 aaKnown RBP7.45□□□□□ -1.22
HMGCR-202ENST00000343975 TESMINQ9Y4I5 508 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 PCDHGB6Q9Y5F9 930 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 GMEB1Q9Y692 573 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 CACNA1GO43497 2377 aa7.45□□□□□ -1.22
HMGCR-202ENST00000343975 TRGV5A0A0B4J1U4 118 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms