RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PLEKHA8Q96JA3 519 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 ZNF578Q96N58 590 aaPredicted RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 TSSK6Q9BXA6 273 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 CDCA4Q9BXL8 241 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 AKIRIN1Q9H9L7 192 aaPredicted RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 MKKSQ9NPJ1 570 aaPredicted RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 CBLCQ9ULV8 474 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 IGHV3-20A0A0C4DH32 117 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 TRAPPC13A5PLN9 417 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 NTN3O00634 580 aaPredicted RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 DBTP11182 482 aaKnown RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 PIPP12273 146 aaPredicted RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 FUT1P19526 365 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 FPR3P25089 353 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 BMXP51813 675 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 SMSP52788 366 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 OCLNQ16625 522 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 NKAIN1Q4KMZ8 207 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 LCN10Q6JVE6 187 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 FAM26EQ8N5C1 309 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 OR4Q3Q8NH05 313 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 PFN4Q8NHR9 129 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 TEX47Q8TBZ9 253 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 ZNF721Q8TF20 911 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 EFHD2Q96C19 240 aaPredicted RBP19.68■□□□□ 0.74
SOX17-201ENST00000297316 POLE3Q9NRF9 147 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 IL20RAQ9UHF4 553 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 GPR52Q9Y2T5 361 aa19.68■□□□□ 0.74
SOX17-201ENST00000297316 KHNYNO15037 678 aaKnown RBP19.67■□□□□ 0.74
SOX17-201ENST00000297316 SNAPC1Q16533 368 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 KMT2EQ8IZD2 1858 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 LRR1Q96L50 414 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 NUDT9Q9BW91 350 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 NRSN2Q9GZP1 204 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 C20orf141Q9NUB4 165 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 FLRT3Q9NZU0 649 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 CLEC2DQ9UHP7 191 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 ZNF223Q9UK11 482 aaPredicted RBP19.67■□□□□ 0.74
SOX17-201ENST00000297316 EFCAB7A8K855 629 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 IGKV3-11P04433 115 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 ELAVL1Q15717 326 aaKnown RBP19.67■□□□□ 0.74
SOX17-201ENST00000297316 SLC30A6Q6NXT4 461 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 SLC27A4Q6P1M0 643 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 MRGPREQ86SM8 312 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 OR4C3Q8NH37 302 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 WDR36Q8NI36 951 aaKnown RBP19.67■□□□□ 0.74
SOX17-201ENST00000297316 Q96MT0 163 aa19.67■□□□□ 0.74
SOX17-201ENST00000297316 ZNF582Q96NG8 517 aaPredicted RBP19.67■□□□□ 0.74
SOX17-201ENST00000297316 NXF5Q9H1B4 397 aaKnown RBP19.67■□□□□ 0.74
SOX17-201ENST00000297316 COL5A1P20908 1838 aaPredicted RBP19.66■□□□□ 0.74
SOX17-201ENST00000297316 CDC14CA4D256 554 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 DRD5P21918 477 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 GADD45AP24522 165 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 DUSP3P51452 185 aaPredicted RBP19.66■□□□□ 0.74
SOX17-201ENST00000297316 NDUFAF6Q330K2 333 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 DESI1Q6ICB0 168 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 SLC46A3Q7Z3Q1 461 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 PMEPA1Q969W9 287 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 BCL7BQ9BQE9 202 aa19.66■□□□□ 0.74
SOX17-201ENST00000297316 CH25HO95992 272 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 ZGLP1P0C6A0 271 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 BIKQ13323 160 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 ARMCX4Q5H9R4 360 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 C16orf87Q6PH81 154 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 ZNF620Q6ZNG0 422 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 PPP1R3BQ86XI6 285 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 OR7G1Q8NGA0 311 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 RHBDD1Q8TEB9 315 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 GAL3ST4Q96RP7 486 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 ATP13A2Q9NQ11 1180 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 DNAJB12Q9NXW2 375 aaKnown RBP19.65■□□□□ 0.74
SOX17-201ENST00000297316 PRODH2Q9UF12 536 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.65■□□□□ 0.74
SOX17-201ENST00000297316 J3QRK9 145 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 KPNA4O00629 521 aaPredicted RBP19.65■□□□□ 0.74
SOX17-201ENST00000297316 SLC22A1O15245 554 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 HSMCR30P0CW71 290 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 CCL4P13236 92 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 MAKP20794 623 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 STAT5AP42229 794 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 FAM69BQ5VUD6 431 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 PAQR6Q6TCH4 344 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 PRR22Q8IZ63 422 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 GRHL3Q8TE85 626 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 DPH1Q9BZG8 443 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 RXFP3Q9NSD7 469 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 CHCHD3Q9NX63 227 aaKnown RBP19.65■□□□□ 0.74
SOX17-201ENST00000297316 TESQ9UGI8 421 aaKnown RBP19.65■□□□□ 0.74
SOX17-201ENST00000297316 CACNA1HO95180 2353 aa19.65■□□□□ 0.74
SOX17-201ENST00000297316 NPIPB9F8W1W9 429 aa19.64■□□□□ 0.74
SOX17-201ENST00000297316 CNOT3O75175 753 aaKnown RBP19.64■□□□□ 0.74
SOX17-201ENST00000297316 CLPXO76031 633 aa19.64■□□□□ 0.74
SOX17-201ENST00000297316 LDOC1O95751 146 aaPredicted RBP19.64■□□□□ 0.74
SOX17-201ENST00000297316 CSTF2P33240 577 aaKnown RBP eCLIP19.64■□□□□ 0.74
SOX17-201ENST00000297316 MED22Q15528 200 aa19.64■□□□□ 0.74
SOX17-201ENST00000297316 SOWAHCQ53LP3 525 aaPredicted RBP19.64■□□□□ 0.74
SOX17-201ENST00000297316 ZNF385CQ66K41 422 aaPredicted RBP19.64■□□□□ 0.74
SOX17-201ENST00000297316 SLC15A4Q8N697 577 aa19.64■□□□□ 0.74
SOX17-201ENST00000297316 TMEM163Q8TC26 289 aa19.64■□□□□ 0.74
SOX17-201ENST00000297316 PMM1Q92871 262 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms