RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 OR2I1PQ8NGU4 316 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CNOT9Q92600 299 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 RFKQ969G6 155 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 HS6ST2Q96MM7 605 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 TRIM2Q9C040 744 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 MED17Q9NVC6 651 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CHCHD3Q9NX63 227 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 DHCR7Q9UBM7 475 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 CBLCQ9ULV8 474 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 TMEM5Q9Y2B1 443 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 DTX4Q9Y2E6 619 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 MED31Q9Y3C7 131 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 MYL12BO14950 172 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 RAB36O95755 333 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 DDAH2O95865 285 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 IGKV1D-16P01601 117 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 HMGN1P05114 100 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 IFI30P13284 250 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 GADD45AP24522 165 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ACP1P24666 158 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ATP12AP54707 1039 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 SLC37A1P57057 533 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDPN-201ENST00000294489 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDPN-201ENST00000294489 MINDY4Q4G0A6 757 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 PRAMEF17Q5VTA0 474 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 SLC30A6Q6NXT4 461 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ZNF550Q7Z398 422 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 POGLUT1Q8NBL1 392 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 OR52L1Q8NGH7 329 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 DYNC2LI1Q8TCX1 351 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 OR5M11Q96RB7 305 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ASXL3Q9C0F0 2248 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 UNC119BA6NIH7 251 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 CCRL2O00421 344 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 LYPD3O95274 346 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 FGF5P12034 268 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 BMP7P18075 431 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 MYL12AP19105 171 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 BMXP51813 675 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 SPHARQ15513 63 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 RPL13AP3Q6NVV1 102 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 USP43Q70EL4 1123 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 CMIPQ8IY22 773 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ANKK1Q8NFD2 765 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 PROKR2Q8NFJ6 384 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ZNF721Q8TF20 911 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 DPH1Q9BZG8 443 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 DCSTAMPQ9H295 470 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 PNO1Q9NRX1 252 aaKnown RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 DIMT1Q9UNQ2 313 aaKnown RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 CFL2Q9Y281 166 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 GPR52Q9Y2T5 361 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 UNC13CQ8NB66 2214 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 SPTBP11277 2137 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 CDC42EP2O14613 210 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 CHP2O43745 196 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 CYC1P08574 325 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 INHBBP09529 407 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 UGT2B10P36537 528 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 MPLP40238 635 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 PRKCDQ05655 676 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 RAB40BQ12829 278 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 FGFBP1Q14512 234 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 ELAVL1Q15717 326 aaKnown RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 NNATQ16517 81 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 TSTQ16762 297 aaKnown RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 PGGHGQ32M88 737 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 BMPERQ8N8U9 685 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 KBTBD8Q8NFY9 601 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 GRHL3Q8TE85 626 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 VMP1Q96GC9 406 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 SENP5Q96HI0 755 aaPredicted RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 DNAJB12Q9NXW2 375 aaKnown RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 H2AFY2Q9P0M6 372 aaPredicted RBP8.43□□□□□ -1.06
PDPN-201ENST00000294489 RPS6KB2Q9UBS0 482 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 CLCA3PQ9Y6N3 262 aa8.43□□□□□ -1.06
PDPN-201ENST00000294489 A0A0B4J2E0 115 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 LOC100506127A0A0U1RQW1 187 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 A0A1B0GX12 115 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 VSTM2BA6NLU5 285 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 D6RAR5 112 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 KPNA4O00629 521 aaPredicted RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 POLR1CO15160 346 aaPredicted RBP8.42□□□□□ -1.06
PDPN-201ENST00000294489 SURF4O15260 269 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 RCBTB2O95199 551 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 CH25HO95992 272 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 SCG5P05408 212 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 ADRA2AP08913 450 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 PTNP21246 168 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 MTNR1AP48039 350 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 NUBP1P53384 320 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 WDR88Q6ZMY6 472 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 NANOGP1Q8N7R0 232 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 BCORP1Q8N888 145 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 OR52I1Q8NGK6 324 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 OR9Q1Q8NGQ5 310 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 OR4Q3Q8NH05 313 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 PFN4Q8NHR9 129 aa8.42□□□□□ -1.06
PDPN-201ENST00000294489 FANK1Q8TC84 345 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms