RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TAS2R3Q9NYW6 316 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 ZNF337Q9Y3M9 751 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 F10P00742 488 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 PTGS2P35354 604 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 BDH1Q02338 343 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 PRDX1Q06830 199 aaKnown RBP16.21■□□□□ 0.19
SHANK1-201ENST00000293441 OPN5Q6U736 354 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 FAM174AQ8TBP5 190 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 PLEKHA3Q9HB20 300 aa16.21■□□□□ 0.19
SHANK1-201ENST00000293441 GPR75O95800 540 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 AIFM1O95831 613 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 ERVK-16P61578 105 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 PRAMEF20Q5VT98 475 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 PGM2L1Q6PCE3 622 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 SERPINA11Q86U17 422 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 GRAMD2AQ8IUY3 354 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 OR1J4Q8NGS1 313 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 CPT1CQ8TCG5 803 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 B3GNT3Q9Y2A9 372 aa16.21■□□□□ 0.18
SHANK1-201ENST00000293441 PCGF3Q3KNV8 242 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 GAREM2Q75VX8 874 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 MRPL38Q96DV4 380 aaKnown RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 MAELQ96JY0 434 aaKnown RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 R3HDMLQ9H3Y0 253 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 WNT4P56705 351 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 ACTBP60709 375 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 ACTG1P63261 375 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF610Q8N9Z0 462 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF775Q96BV0 537 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 OBP2BQ9NPH6 170 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 KDM4EB2RXH2 506 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 B8ZZF3 427 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 SLC16A7O60669 478 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 VEZF1Q14119 521 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 CCDC71LQ8N9Z2 235 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 SORT1Q99523 831 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 CARD8Q9Y2G2 431 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 DCDP81605 110 aaKnown RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 SPPL3Q8TCT6 385 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 SENP5Q96HI0 755 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 PDE4DIPQ5VU43 2346 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 GOSR2O14653 212 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 F11P03951 625 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 AHRP35869 848 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 GPR50Q13585 617 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 PPP1R35Q8TAP8 253 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 ADAMTS19Q8TE59 1207 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 DCAF13Q9NV06 445 aaKnown RBP16.2■□□□□ 0.18
SHANK1-201ENST00000293441 TMEM181Q9P2C4 612 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 SLC6A5Q9Y345 797 aa16.2■□□□□ 0.18
SHANK1-201ENST00000293441 LPLP06858 475 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 CTHP32929 405 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 TRIM61Q5EBN2 209 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 VASNQ6EMK4 673 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 MMP21Q8N119 569 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 SLC2A12Q8TD20 617 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 GPR148Q8TDV2 347 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 C3orf30Q96M34 536 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 SAP130Q9H0E3 1048 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 TAS2R8Q9NYW2 309 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 HMX3A6NHT5 357 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 POLR2HP52434 150 aaKnown RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 RAB38P57729 211 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 MS4A2Q01362 244 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 MBTPS1Q14703 1052 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF695Q8IW36 515 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 LILRB2Q8N423 598 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 METTL25Q8N6Q8 603 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF705EA8MWA4 302 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 SRPX2O60687 465 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ICAM2P13598 275 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 CD53P19397 219 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 CDK2P24941 298 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 OR5T1Q8NG75 326 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 OR5L1Q8NGL2 311 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 UTP23Q9BRU9 249 aaKnown RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 LHPPQ9H008 270 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 SNAPC5O75971 98 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ETV4P43268 484 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 FGL1Q08830 312 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 SYPL1Q16563 259 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 OR14A16Q8NHC5 309 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 CHFRQ96EP1 664 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 FAM210AQ96ND0 272 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF649Q9BS31 505 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 UBQLN2Q9UHD9 624 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 MEGF11A6BM72 1044 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 BMP4P12644 408 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ERP29P30040 261 aaKnown RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ADRA1AP35348 466 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 CXCR4P61073 352 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ADARB1P78563 741 aaKnown RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 POU3F1Q03052 451 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 MOB3CQ70IA8 216 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 ZNF595Q8IYB9 648 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 DDX31Q9H8H2 851 aaKnown RBP16.19■□□□□ 0.18
SHANK1-201ENST00000293441 KLHL42Q9P2K6 505 aa16.19■□□□□ 0.18
SHANK1-201ENST00000293441 MEIS3P1A6NDR6 274 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms