RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 IDNKQ5T6J7 187 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 HBMQ6B0K9 141 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 FCRL6Q6DN72 434 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 PARM1Q6UWI2 310 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 SLC37A3Q8NCC5 494 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 NLGN4YQ8NFZ3 816 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 OR10H4Q8NGA5 316 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 LILRB4Q8NHJ6 448 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 PMM1Q92871 262 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 FGF14Q92915 247 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 TSACCQ96A04 125 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 RERGQ96A58 199 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 AHCYL2Q96HN2 611 aaKnown RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 RNF170Q96K19 258 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 UBL7Q96S82 380 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 TIMP4Q99727 224 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 GABRG3Q99928 467 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 IFT27Q9BW83 186 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 IGFLR1Q9H665 355 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 FBRSQ9HAH7 460 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 KCNE5Q9UJ90 142 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 KLHL21Q9UJP4 597 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 PILRAQ9UKJ1 303 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 MED31Q9Y3C7 131 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 ZC3H12DA2A288 527 aaKnown RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 CENPBD1B2RD01 187 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 AK1P00568 194 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 SAGP10523 405 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 POLR2CP19387 275 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 ELK1P19419 428 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 RPS7P62081 194 aaKnown RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 CSTF1Q05048 431 aaKnown RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 TRAM1Q15629 374 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 C6orf183Q5T699 404 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 GARNL3Q5VVW2 1013 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 GPALPP1Q8IXQ4 340 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 TMEM99Q8N816 258 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 OR10G6Q8NH81 332 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 ZFPM2Q8WW38 1151 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 PTP4A1Q93096 173 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 TEAD3Q99594 435 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 ZFYVE21Q9BQ24 234 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 NDC1Q9BTX1 674 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 HCAR1Q9BXC0 346 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 TMEM74BQ9NUR3 256 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 FBXO34Q9NWN3 711 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 NLKQ9UBE8 527 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 EXTL2Q9UBQ6 330 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 FBXL21Q9UKT6 434 aa15.22■□□□□ 0.03
HOXD3-201ENST00000249440 SIRT4Q9Y6E7 314 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 ARHGEF17Q96PE2 2063 aaPredicted RBP15.22■□□□□ 0.03
HOXD3-201ENST00000249440 LOC105369274A0A096LPK9 316 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 LOC102723532A0A0G2JNH3 316 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 ZNF860A6NHJ4 632 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 H0Y8X5 98 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 DVL2O14641 736 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 LYPD3O95274 346 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 MT-ND5P03915 603 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 FAM157BP0CG42 384 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 TALDO1P37837 337 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 SLC16A1P53985 500 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 AMZ1Q400G9 498 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 LRRC28Q86X40 367 aaPredicted RBP15.21■□□□□ 0.03
HOXD3-201ENST00000249440 TCTE3Q8IZS6 198 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 OR4N4Q8N0Y3 316 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 OR5M3Q8NGP4 307 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 DOK4Q8TEW6 326 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 KISS1RQ969F8 398 aaPredicted RBP15.21■□□□□ 0.03
HOXD3-201ENST00000249440 KCTD12Q96CX2 325 aaKnown RBP15.21■□□□□ 0.03
HOXD3-201ENST00000249440 MYADMQ96S97 322 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 BEX2Q9BXY8 128 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 TMEM168Q9H0V1 697 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 C14orf105Q9NVL8 296 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 ACTR10Q9NZ32 417 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 SCML1Q9UN30 329 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 SIGLEC7Q9Y286 467 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 CLCA3PQ9Y6N3 262 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 FANCMQ8IYD8 2048 aa15.21■□□□□ 0.03
HOXD3-201ENST00000249440 NPIPA5A0A0B4J1W7 369 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 NPIPA7E9PJI5 369 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 PLPP2O43688 288 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 FGF17O60258 216 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 REM1O75628 298 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 APBB3O95704 486 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 GPR75O95800 540 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 NPIPA8P0DM63 369 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 CLDN20P56880 219 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 ZNF57Q68EA5 555 aaPredicted RBP15.21■□□□□ 0.02
HOXD3-201ENST00000249440 TIGD3Q6B0B8 471 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 FIGNL1Q6PIW4 674 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 TRILQ7L0X0 811 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 ABI3BPQ7Z7G0 1075 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 NR2C2APQ86WQ0 139 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 ZNF655Q8N720 491 aaPredicted RBP15.21■□□□□ 0.02
HOXD3-201ENST00000249440 OR4C6Q8NH72 309 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 MARVELD1Q9BSK0 173 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 TWSG1Q9GZX9 223 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 OR51V1Q9H2C8 321 aa15.21■□□□□ 0.02
HOXD3-201ENST00000249440 SLA2Q9H6Q3 261 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms