RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 DAPL1A0PJW8 107 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 SMLR1H3BR10 107 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 SEC14L5O43304 696 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 LANCL1O43813 399 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 ADAM11O75078 769 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 LAMP2P13473 410 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 HOXB2P14652 356 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 BMP7P18075 431 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 GABRA3P34903 492 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 ACVR1BP36896 505 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 ZNF57Q68EA5 555 aaPredicted RBP23.69■■□□□ 1.38
RAB40C-201ENST00000248139 DGAT2L6Q6ZPD8 337 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 ASB18Q6ZVZ8 466 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 MEPCEQ7L2J0 689 aaKnown RBP23.69■■□□□ 1.38
RAB40C-201ENST00000248139 GHDCQ8N2G8 530 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 OR13C5Q8NGS8 318 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 NR4A3Q92570 626 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 SERINC2Q96SA4 455 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 PBX4Q9BYU1 374 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 BABAM2Q9NXR7 383 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 YBX2Q9Y2T7 364 aaKnown RBP23.69■■□□□ 1.38
RAB40C-201ENST00000248139 SLC22A7Q9Y694 548 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 H0YGG7 62 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 RGS13O14921 159 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 CHST10O43529 356 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 PAHP00439 452 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 NTSR1P30989 418 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 ARF3P61204 181 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 RFLNBQ8N5W9 214 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 KISS1RQ969F8 398 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 TM4SF19Q96DZ7 209 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 C1QTNF7Q9BXJ2 289 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 ZNF350Q9GZX5 532 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 PIGUQ9H490 435 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 MEPEQ9NQ76 525 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 EXTL2Q9UBQ6 330 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 ALG5Q9Y673 324 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 FAM240BA0A1B0GVZ2 78 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 SMIM10L1P0DMW3 83 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 TLX1P31314 330 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 PRPF38BQ5VTL8 546 aaKnown RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 ANKRD54Q6NXT1 300 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 FBXO46Q6PJ61 603 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 ZNF619Q8N2I2 560 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 C17orf47Q8NEP4 570 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 NT5CQ8TCD5 201 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 SCARF2Q96GP6 870 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-201ENST00000248139 SMIM10Q96HG1 83 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 RNF170Q96K19 258 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 RIPOR3Q96MK2 946 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 SNX18Q96RF0 628 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 PHF11Q9UIL8 331 aa23.68■■□□□ 1.38
RAB40C-201ENST00000248139 OR6C70A6NIJ9 312 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 LYRM1O43325 122 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 STX11O75558 287 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 KLF8O95600 359 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-201ENST00000248139 SYCE2Q6PIF2 218 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 USP53Q70EK8 1073 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ZNF438Q7Z4V0 828 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 SYT9Q86SS6 491 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 OR52L1Q8NGH7 329 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 OR51L1Q8NGJ5 315 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 BPIFA2Q96DR5 249 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 IL21RQ9HBE5 538 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 MED17Q9NVC6 651 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ACTR10Q9NZ32 417 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 NTMQ9P121 344 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ATG2AQ2TAZ0 1938 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 LYPD3O95274 346 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 FOXK2Q01167 660 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 CDK10Q15131 360 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 FHL5Q5TD97 284 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ARL14Q8N4G2 192 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ASCC1Q8N9N2 400 aaKnown RBP23.67■■□□□ 1.38
RAB40C-201ENST00000248139 CNOT9Q92600 299 aaKnown RBP23.67■■□□□ 1.38
RAB40C-201ENST00000248139 C19orf53Q9UNZ5 99 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-201ENST00000248139 FANCMQ8IYD8 2048 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 OR2W5A6NFC9 320 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 EPOPA6NHQ4 379 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 J3QLW9 94 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ZNF19P17023 458 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 ARFIP1P53367 373 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 NOXA1Q86UR1 476 aa23.67■■□□□ 1.38
RAB40C-201ENST00000248139 CDHR4A6H8M9 788 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 PPP1R3DO95685 299 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 EGFP01133 1207 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 TFPIP10646 304 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 NID1P14543 1247 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 NDUFS1P28331 727 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 INPP1P49441 399 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 OR12D2P58182 307 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 CRMP1Q14194 572 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 DEFB110Q30KQ9 67 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 RNASE12Q5GAN4 147 aaKnown RBP23.66■■□□□ 1.38
RAB40C-201ENST00000248139 YIPF7Q8N8F6 280 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 OR4N2Q8NGD1 307 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 OR5W2Q8NH69 310 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 SIPA1Q96FS4 1042 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 TMEM43Q9BTV4 400 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 TCEAL2Q9H3H9 227 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms