RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 MCHR1Q99705 422 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 SEZ6LQ9BYH1 1024 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 NOX3Q9HBY0 568 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 KIF25Q9UIL4 384 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TMEM72A0PK05 275 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 DVL1O14640 695 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 PHOX2AO14813 284 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 NUDT21O43809 227 aaKnown RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 PCSK2P16519 638 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 HLA-FP30511 346 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 DVL1P1P54792 670 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 POU6F2P78424 691 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 ADIRFQ15847 76 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 PLAC9Q5JTB6 97 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 HEPHL1Q6MZM0 1159 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 BRI3BPQ8WY22 251 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ARPC5LQ9BPX5 153 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 FBXO45P0C2W1 286 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TCN2P20062 427 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 MYF6P23409 242 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 PTGER3P43115 390 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TNK1Q13470 666 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ZNF791Q3KP31 576 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 FRG2Q64ET8 278 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 KCTD18Q6PI47 426 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 CSNK1A1LQ8N752 337 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 OR51Q1Q8NH59 317 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 FRG2BQ96QU4 278 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 RBP7Q96R05 134 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 OR7D2Q96RA2 312 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 NIPSNAP3BQ9BS92 247 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 PPRC1Q5VV67 1664 aaKnown RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 DISP1Q96F81 1524 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 A0A1W2PRV1 198 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 SOBPA7XYQ1 873 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ZNF736B4DX44 427 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 DOK2O60496 412 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 AGR2O95994 175 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 OR13C7P0DN81 318 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 OR12D1P0DN82 309 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TESK1Q15569 626 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 C4orf17Q53FE4 359 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ZNF783Q6ZMS7 281 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 GAREM2Q75VX8 874 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 NUDT13Q86X67 352 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 FRMD1Q8N878 549 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 PNPLA1Q8N8W4 532 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ZFYVE21Q9BQ24 234 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 CCM2LQ9NUG4 571 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 GPR52Q9Y2T5 361 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 MADDQ8WXG6 1647 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 C2orf78A6NCI8 922 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 HCRTO43612 131 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 DLX3O60479 287 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 HOXD13P35453 343 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 TMEM115Q12893 351 aaPredicted RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 PDE7AQ13946 482 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 WDR31Q8NA23 367 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 OR4F6Q8NGB9 312 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 ST8SIA4Q92187 359 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 DCLRE1CQ96SD1 692 aaKnown RBP10.48□□□□□ -0.73
MSH6-201ENST00000234420 MCOLN1Q9GZU1 580 aa10.48□□□□□ -0.73
MSH6-201ENST00000234420 OR2C1O95371 312 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 AKAIN1P0CW23 69 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 NME1P15531 152 aaKnown RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 SUMO1P63165 101 aaKnown RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 PCBP1Q15365 356 aaKnown RBP eCLIP10.47□□□□□ -0.73
MSH6-201ENST00000234420 ACBD7Q8N6N7 88 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 HAS1Q92839 578 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ENKD1Q9H0I2 346 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SLC25A51Q9H1U9 297 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 NIPAL2Q9H841 368 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 RDH14Q9HBH5 336 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 TM7SF3Q9NS93 570 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 C2orf42Q9NWW7 574 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 FAM96BQ9Y3D0 163 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SGK494L7N484 410 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 HTR3BO95264 441 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 DLX5P56178 289 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 GRB7Q14451 532 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SFRP5Q5T4F7 317 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ANKRD53Q8N9V6 530 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 MAFAQ8NHW3 353 aaPredicted RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 SPIN2AQ99865 258 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 SPIN2BQ9BPZ2 258 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 MAGEH1Q9H213 219 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 MEPEQ9NQ76 525 aaPredicted RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 SUSD2Q9UGT4 822 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ATP23Q9Y6H3 246 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 PRDM15P57071 1507 aaPredicted RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 A6NHS1 94 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ZNF207O43670 478 aaKnown RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 APBB3O95704 486 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ANXA7P20073 488 aaKnown RBP10.47□□□□□ -0.73
MSH6-201ENST00000234420 OMGP23515 440 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 PLBD1Q6P4A8 553 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 PARP16Q8N5Y8 322 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 ZBTB44Q8NCP5 570 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 OR4K1Q8NGD4 311 aa10.47□□□□□ -0.73
MSH6-201ENST00000234420 OR51T1Q8NGJ9 327 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms