RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ZNF117Q03924 483 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 TRAP1Q12931 704 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 NDUFAF6Q330K2 333 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 GLIPR1L2Q4G1C9 344 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 LRRC23Q53EV4 343 aaPredicted RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 CYBRD1Q53TN4 286 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 LCN8Q6JVE9 175 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 CBLN3Q6UW01 205 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 CBLL1Q75N03 491 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 PLCZ1Q86YW0 608 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 SMYD1Q8NB12 490 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 LSM14AQ8ND56 463 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 BHLHE22Q8NFJ8 381 aaPredicted RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 OR2M3Q8NG83 312 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 SLC35B4Q969S0 331 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 CCDC124Q96CT7 223 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 ZNF597Q96LX8 424 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 RNF145Q96MT1 663 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 LAT2Q9GZY6 243 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 CACYBPQ9HB71 228 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 EXOSC3Q9NQT5 275 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 DCAF13Q9NV06 445 aaKnown RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 OLAHQ9NV23 265 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 RLIMQ9NVW2 624 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 PPP4R1LQ9P1A2 415 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 ICAM5Q9UMF0 924 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 BOKQ9UMX3 212 aaPredicted RBP11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 CARD8Q9Y2G2 431 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 PIEZO2Q9H5I5 2752 aa11.53□□□□□ -0.56
CHMP2A-206ENST00000600118 TNRC6AQ8NDV7 1962 aaKnown RBP11.52□□□□□ -0.56
CHMP2A-206ENST00000600118 ATMQ13315 3056 aa11.52□□□□□ -0.56
CHMP2A-206ENST00000600118 GTPBP1O00178 669 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 GNB5O14775 395 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 HCRTR2O43614 444 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 ADAM11O75078 769 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 LGI1O95970 557 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 SERPINA1P01009 418 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 C8BP07358 591 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 RFPL3SP0C7P2 107 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 ATP6V1B2P21281 511 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 MASP1P48740 699 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 SELENOWP63302 87 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 KLRB1Q12918 225 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 EIPR1Q53HC9 387 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 OR5M10Q6IEU7 315 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 EID3Q8N140 333 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 TOR1AIP2Q8NFQ8 470 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 OR1J4Q8NGS1 313 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 B4GALNT2Q8NHY0 566 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 RASSF5Q8WWW0 418 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 FAM162AQ96A26 154 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 ARSGQ96EG1 525 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 NSMCE2Q96MF7 247 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 GNRHR2Q96P88 292 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 TAAR6Q96RI8 345 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 KLHDC3Q9BQ90 382 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 TTTY12Q9BZ98 90 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 UBQLN3Q9H347 655 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 MED11Q9P086 117 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 FBXL2Q9UKC9 423 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 BAG5Q9UL15 447 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 POMPQ9Y244 141 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 C15orf41Q9Y2V0 281 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 CACNA1BQ00975 2339 aa11.52□□□□□ -0.57
CHMP2A-206ENST00000600118 GMNNO75496 209 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 CBR3O75828 277 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 RASAL1O95294 804 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 FESP07332 822 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 UBTFL6P0CB48 400 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ACAA2P42765 397 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 P2RX1P51575 399 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ZNF136P52737 540 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 PMP22Q01453 160 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 NRF1Q16656 503 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 MTX3Q5HYI7 312 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 DHFR2Q86XF0 187 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ZNF440Q8IYI8 595 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 TEX19Q8NA77 164 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 OR5W2Q8NH69 310 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 SLC39A7Q92504 469 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ZNF524Q96C55 264 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 SH3YL1Q96HL8 342 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 WFDC6Q9BQY6 131 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 DSN1Q9H410 356 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ARMC7Q9H6L4 198 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ZNF703Q9H7S9 590 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 EVA1AQ9H8M9 152 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 LUZP4Q9P127 313 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 RPS6KA6Q9UK32 745 aa11.51□□□□□ -0.57
CHMP2A-206ENST00000600118 ATRXP46100 2492 aa11.5□□□□□ -0.57
CHMP2A-206ENST00000600118 KMT2BQ9UMN6 2715 aaPredicted RBP11.5□□□□□ -0.57
CHMP2A-206ENST00000600118 TCRBV5S2A0A599 114 aa11.5□□□□□ -0.57
CHMP2A-206ENST00000600118 ANKUB1A6NFN9 424 aa11.5□□□□□ -0.57
CHMP2A-206ENST00000600118 ETV2O00321 342 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms