RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 NDUFAF6Q330K2 333 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 FLYWCH1Q4VC44 716 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 SAXO2Q658L1 398 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 ZNF621Q6ZSS3 439 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 GRAMD2AQ8IUY3 354 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 ZNF614Q8N883 585 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 PHOSPHO1Q8TCT1 267 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 INTS12Q96CB8 462 aaKnown RBP13.13□□□□□ -0.31
LITAF-208ENST00000571627 ITCHQ96J02 903 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 PIGQQ9BRB3 760 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 SLC35A5Q9BS91 424 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 OR51I1Q9H343 314 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 RABEP2Q9H5N1 569 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 EXD2Q9NVH0 621 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
LITAF-208ENST00000571627 TRIM33Q9UPN9 1127 aa13.13□□□□□ -0.31
LITAF-208ENST00000571627 HRNRQ86YZ3 2850 aaPredicted RBP13.12□□□□□ -0.31
LITAF-208ENST00000571627 A0A1W2PQD3 144 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 EEF1E1-BLOC1S5C9J1V9 151 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
LITAF-208ENST00000571627 HCRTR2O43614 444 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 TNFRSF21O75509 655 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 TROVE2P10155 538 aaKnown RBP eCLIP13.12□□□□□ -0.31
LITAF-208ENST00000571627 SSTR2P30874 369 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 MAGEA8P43361 318 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 KHKP50053 298 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 ASCL1P50553 236 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 ZNF117Q03924 483 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 SQLEQ14534 574 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 BCL2A1Q16548 175 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 PLPPR5Q32ZL2 321 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 KLHL26Q53HC5 615 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 ATAD3BQ5T9A4 648 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 TNFAIP8L2Q6P589 184 aaPredicted RBP13.12□□□□□ -0.31
LITAF-208ENST00000571627 MISPQ8IVT2 679 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 MEIOBQ8N635 442 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 ZNF527Q8NB42 609 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 CHDHQ8NE62 594 aaPredicted RBP13.12□□□□□ -0.31
LITAF-208ENST00000571627 OR9I1Q8NGQ6 314 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 B4GALNT2Q8NHY0 566 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 RAB8BQ92930 207 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 WNT2BQ93097 391 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 LURAP1Q96LR2 239 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 UCN2Q96RP3 112 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 SDF2Q99470 211 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 TM9SF2Q99805 663 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 INPP5KQ9BT40 448 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 CCDC134Q9H6E4 229 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 MED17Q9NVC6 651 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 DCTN4Q9UJW0 460 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 L3MBTL1Q9Y468 752 aa13.12□□□□□ -0.31
LITAF-208ENST00000571627 OTOGQ6ZRI0 2925 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 NPIPB9F8W1W9 429 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 RCBTB2O95199 551 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 ANP32DO95626 131 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 KRT75O95678 551 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 OPN1LWP04000 364 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
LITAF-208ENST00000571627 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 CDKN2CP42773 168 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 ZNF41P51814 821 aaPredicted RBP13.11□□□□□ -0.31
LITAF-208ENST00000571627 ATP12AP54707 1039 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 MYBPHQ13203 477 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 GPR68Q15743 365 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 ARHGAP11BQ3KRB8 267 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 GLYR1Q49A26 553 aaPredicted RBP13.11□□□□□ -0.31
LITAF-208ENST00000571627 TIGD2Q4W5G0 525 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 METTL21CQ5VZV1 264 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 CBLN3Q6UW01 205 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 C16orf62Q7Z3J2 963 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 P4HA3Q7Z4N8 544 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 FIG4Q92562 907 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 ARSGQ96EG1 525 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 C14orf79Q96F83 325 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 THOC1Q96FV9 657 aaKnown RBP13.11□□□□□ -0.31
LITAF-208ENST00000571627 ZNF845Q96IR2 970 aaPredicted RBP13.11□□□□□ -0.31
LITAF-208ENST00000571627 RNF145Q96MT1 663 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 PINK1Q9BXM7 581 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 TMEM185BQ9H7F4 350 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 CARD8Q9Y2G2 431 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 MPDZO75970 2070 aa13.11□□□□□ -0.31
LITAF-208ENST00000571627 A0A087WZY1 265 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 A0A0G2JND7 137 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 H3BNH8 94 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 LINC01387J3KSC0 135 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 SYT5O00445 386 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 FCMRO60667 390 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 STX11O75558 287 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 NUDT14O95848 222 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 GSNP06396 782 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 GUSBP08236 651 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 OR12D1P0DN82 309 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 ZNF17P17021 662 aa13.1□□□□□ -0.31
LITAF-208ENST00000571627 NCF2P19878 526 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms