RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 FAM111BQ6SJ93 734 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 Q71RC1 249 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 CXXC5Q7LFL8 322 aaKnown RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 ZNF551Q7Z340 670 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 R3HCC1LQ7Z5L2 792 aaKnown RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 PRIMA1Q86XR5 153 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 C9orf40Q8IXQ3 194 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 GPALPP1Q8IXQ4 340 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 SAMD14Q8IZD0 417 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 CLECL1Q8IZS7 167 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 FAM9CQ8IZT9 166 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 CYP4Z2PQ8N1L4 340 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 MIER2Q8N344 545 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 OR2L13Q8N349 312 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 ZNF441Q8N8Z8 693 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 MORN4Q8NDC4 146 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 C7orf57Q8NEG2 295 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 WFDC11Q8NEX6 87 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 B3GNT7Q8NFL0 401 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 OR7G2Q8NG99 324 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 OR52N2Q8NGI0 321 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 OR14A16Q8NHC5 309 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 FAM222BQ8WU58 562 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 RIT1Q92963 219 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 NCLNQ969V3 563 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 SENP5Q96HI0 755 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 FBXL20Q96IG2 436 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 DGAT2Q96PD7 388 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 ELAC2Q9BQ52 826 aaKnown RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 DUSP26Q9BV47 211 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 DEFB126Q9BYW3 111 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 DPY30Q9C005 99 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 MYLK2Q9H1R3 596 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 ZDHHC11Q9H8X9 412 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 ANKRA2Q9H9E1 313 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 SERHLQ9NQF3 203 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 SAR1AQ9NR31 198 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 PNPLA3Q9NST1 481 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 TMEM45AQ9NWC5 275 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 NTMQ9P121 344 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 PSME2Q9UL46 239 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 DTX4Q9Y2E6 619 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 ZNF780BQ9Y6R6 833 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 SCN3AQ9NY46 2000 aa6.5□□□□□ -1.37
CNOT1-218ENST00000569732 PRRC2AP48634 2157 aaKnown RBP6.5□□□□□ -1.37
CNOT1-218ENST00000569732 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 A0A087WV62 115 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 A0A0G2JNJ9 132 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 FAM234BA2RU67 622 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 NPIPA2E9PIF3 369 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 NPIPA3F8WFD2 350 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 UPK1AO00322 258 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 SYT5O00445 386 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 RNASET2O00584 256 aaKnown RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 OR10H2O60403 315 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 PLOD3O60568 738 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 ZNF354AO60765 605 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 SLC22A3O75751 556 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 MPIG6BO95866 241 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 C1QCP02747 245 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 IFNA16P05015 189 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 OSMP13725 252 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 GABRA1P14867 456 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 NT5EP21589 574 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 PTPN6P29350 595 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 NTSP30990 170 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 RFC3P40938 356 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 MAP3K8P41279 467 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 MC3RP41968 323 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 EMDP50402 254 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 CLCN2P51788 898 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 NCBP2P52298 156 aaKnown RBP eCLIP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 POLR2JP52435 117 aaKnown RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 GAB1Q13480 694 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 SQLEQ14534 574 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 DAZAP2Q15038 168 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 EBPQ15125 230 aaKnown RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 FAM174BQ3ZCQ3 159 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 RIPPLY2Q5TAB7 128 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 VASNQ6EMK4 673 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 ZNF585AQ6P3V2 769 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 TMEM107Q6UX40 140 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 WDR53Q7Z5U6 358 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 SLC22A16Q86VW1 577 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 TMEM156Q8N614 296 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 GLB1L3Q8NCI6 653 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 OR7G1Q8NGA0 311 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 OR8K3Q8NH51 312 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 OR5P2Q8WZ92 322 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 HOXB13Q92826 284 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 KAT2AQ92830 837 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 DAZLQ92904 295 aaKnown RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 ERP27Q96DN0 273 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 ELP4Q96EB1 424 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 GIMAP5Q96F15 307 aa6.49□□□□□ -1.37
CNOT1-218ENST00000569732 ZBED6CLQ96FA7 236 aaPredicted RBP6.49□□□□□ -1.37
CNOT1-218ENST00000569732 VMP1Q96GC9 406 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms