RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 DCAKDQ8WVC6 231 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 FIG4Q92562 907 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 HOXB13Q92826 284 aaPredicted RBP7.56□□□□□ -1.2
PALB2-202ENST00000561514 BORCS5Q969J3 196 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 Q9H521 79 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 SLC35C2Q9NQQ7 365 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 ZNF701Q9NV72 531 aaPredicted RBP7.56□□□□□ -1.2
PALB2-202ENST00000561514 FAM120CQ9NX05 1096 aaKnown RBP7.56□□□□□ -1.2
PALB2-202ENST00000561514 ZNF226Q9NYT6 803 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 DKKL1Q9UK85 242 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 C19orf53Q9UNZ5 99 aaPredicted RBP7.56□□□□□ -1.2
PALB2-202ENST00000561514 IFT52Q9Y366 437 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 MXRA5Q9NR99 2828 aa7.56□□□□□ -1.2
PALB2-202ENST00000561514 OR2M5A3KFT3 312 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 NOTOA8MTQ0 251 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 MYO1GB0I1T2 1018 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 C16orf97H3BN30 126 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 H3BNX3 289 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 BOLA2-SMG1P6H3BVE0 249 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 RGS13O14921 159 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 PCDH7O60245 1069 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 OR4F21O95013 312 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 KRT75O95678 551 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 INHBAP08476 426 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 CHN1P15882 459 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 DDCP20711 480 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 IL11P20809 199 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 FUT4P22083 530 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 PRKACBP22694 351 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 IL12BP29460 328 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 ECHS1P30084 290 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 KRT20P35900 424 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 ARL1P40616 181 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 MAP3K8P41279 467 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 GSSP48637 474 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 HTR6P50406 440 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 SUCLG1P53597 346 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 EEFSECP57772 596 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 RPS3AP61247 264 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 MAGOHP61326 146 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 RIPPLY1Q0D2K3 151 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 HEPACAMQ14CZ8 416 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 UAP1Q16222 522 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 KRT71Q3SY84 523 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 UNC50Q53HI1 259 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 ZNF678Q5SXM1 525 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 ZNF362Q5T0B9 420 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 METTL21CQ5VZV1 264 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 FAM180BQ6P0A1 224 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 TIFABQ6ZNK6 161 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 C22orf34Q6ZV56 151 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 Q71RC1 249 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 GGNQ86UU5 652 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 P3H2Q8IVL5 708 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 SLC44A2Q8IWA5 706 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 FAM9CQ8IZT9 166 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 RIBC1Q8N443 379 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 MEIOBQ8N635 442 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 CDYL2Q8N8U2 506 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 OR4K17Q8NGC6 315 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 OR4N2Q8NGD1 307 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 C16orf78Q8WTQ4 265 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 KAT2AQ92830 837 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 MTBPQ96DY7 904 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 MRRFQ96E11 262 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 C1GALT1C1Q96EU7 318 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 ZNF764Q96H86 408 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 ZNF845Q96IR2 970 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 ADGRG7Q96K78 797 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 HBEGFQ99075 208 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 CCL19Q99731 98 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 ELAC2Q9BQ52 826 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 TMEM204Q9BSN7 226 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 MED18Q9BUE0 208 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 BDH2Q9BUT1 245 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 MRPS26Q9BYN8 205 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 RTN4RQ9BZR6 473 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 OPN3Q9H1Y3 402 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 OR10A4Q9H209 315 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 CDC42EP4Q9H3Q1 356 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 ZNF395Q9H8N7 513 aaPredicted RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 ANKRA2Q9H9E1 313 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 KLHL28Q9NXS3 571 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 TAS2R9Q9NYW1 312 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 NFU1Q9UMS0 254 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 WBP11Q9Y2W2 641 aaKnown RBP7.55□□□□□ -1.2
PALB2-202ENST00000561514 FREM3P0C091 2139 aa7.55□□□□□ -1.2
PALB2-202ENST00000561514 FUOMA2VDF0 154 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 C7orf72A4D263 438 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 TRIM49D1C9J1S8 452 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 NPIPB8E9PQR5 432 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 UPK1AO00322 258 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 KLF4O43474 513 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 SS18L1O75177 396 aaPredicted RBP7.54□□□□□ -1.2
PALB2-202ENST00000561514 ULK1O75385 1050 aa7.54□□□□□ -1.2
PALB2-202ENST00000561514 NME6O75414 186 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms