RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EPHA3P29320 983 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 CCKARP32238 428 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 ART1P52961 327 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 HBA1P69905 142 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 IRX1P78414 480 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-204ENST00000561065 DAZAP2Q15038 168 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-204ENST00000561065 OR4F3Q6IEY1 312 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 C6orf120Q7Z4R8 191 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 MTERF4Q7Z6M4 381 aaKnown RBP14.37□□□□□ -0.11
LMX1B-204ENST00000561065 FNDC9Q8TBE3 224 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 SMPDL3BQ92485 455 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 CDS1Q92903 461 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 C7orf26Q96N11 449 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 PIGQQ9BRB3 760 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 GPATCH2Q9NW75 528 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 MARCOQ9UEW3 520 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-204ENST00000561065 PACSIN3Q9UKS6 424 aa14.37□□□□□ -0.11
LMX1B-204ENST00000561065 NPIPA5A0A0B4J1W7 369 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 A0A1W2PQD3 144 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 A8MXE2 369 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 NPIPA7E9PJI5 369 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 SLC22A3O75751 556 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 CPSF4O95639 269 aaKnown RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 NPIPA8P0DM63 369 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 EPXP11678 715 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 H2AFXP16104 143 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 PSMA4P25789 261 aaKnown RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 CHI3L1P36222 383 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 CPOXP36551 454 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 CPA2P48052 419 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 RNF144AP50876 292 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 STX1BP61266 288 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 PPP2R2AP63151 447 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 GUSBP1Q15486 140 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 PLPPR5Q32ZL2 321 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 P4HA3Q7Z4N8 544 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 KIF18BQ86Y91 864 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 MEIOBQ8N635 442 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 METTL25Q8N6Q8 603 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 OIT3Q8WWZ8 545 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 STARD4Q96DR4 205 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 OR52E6Q96RD3 313 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 PIGMQ9H3S5 423 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 WDR55Q9H6Y2 383 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 RMND5AQ9H871 391 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 RNF122Q9H9V4 155 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 CCM2LQ9NUG4 571 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-204ENST00000561065 AIG1Q9NVV5 245 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 BTNL2Q9UIR0 455 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 ST6GALNAC2Q9UJ37 374 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 PLEKHA6Q9Y2H5 1048 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 KCNE3Q9Y6H6 103 aa14.36□□□□□ -0.11
LMX1B-204ENST00000561065 GOLGA8QA0A0J9YX86 632 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 GOLGA8OA6NCC3 632 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 GOLGA8NF8WBI6 632 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 GTPBP1O00178 669 aaKnown RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 POLR3GO15318 223 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 OIP5O43482 229 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 DIAPH2O60879 1101 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 AQP8O94778 261 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 ZNF17P17021 662 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 KIR2DL2P43627 348 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 SLC6A8P48029 635 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 SIRPAP78324 504 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 PON3Q15166 354 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 CTU2Q2VPK5 515 aaKnown RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 FAM174BQ3ZCQ3 159 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 PDCD4Q53EL6 469 aaKnown RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 DCST2Q5T1A1 773 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 BTLAQ7Z6A9 289 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 OR5AK3PQ8NH89 298 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 POC1BQ8TC44 478 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 SH3YL1Q96HL8 342 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 ADGRG7Q96K78 797 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 OPN3Q9H1Y3 402 aaPredicted RBP14.35□□□□□ -0.11
LMX1B-204ENST00000561065 SERHL2Q9H4I8 314 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 ZIM2Q9NZV7 527 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 HEATR5AQ86XA9 2040 aa14.35□□□□□ -0.11
LMX1B-204ENST00000561065 MAP1AP78559 2803 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-204ENST00000561065 MTORP42345 2549 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 RNF103-CHMP3A0A140T963 221 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 TNFRSF21O75509 655 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 STX11O75558 287 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 KRT75O95678 551 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 CGAP01215 116 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 HRGP04196 525 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 PGRP06401 933 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 CRHP06850 196 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 MAGEA8P43361 318 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 ZNF41P51814 821 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-204ENST00000561065 ATP12AP54707 1039 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 RPS3AP61247 264 aaKnown RBP14.34□□□□□ -0.11
LMX1B-204ENST00000561065 POU4F3Q15319 338 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 ZNF474Q6S9Z5 364 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-204ENST00000561065 C16orf62Q7Z3J2 963 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 MIER2Q8N344 545 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 GTPBP8Q8N3Z3 284 aaPredicted RBP14.34□□□□□ -0.11
LMX1B-204ENST00000561065 CNEP1R1Q8N9A8 125 aa14.34□□□□□ -0.11
LMX1B-204ENST00000561065 NINJ1Q92982 152 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms