RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 EPORP19235 508 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CD53P19397 219 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C4BPBP20851 252 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 IDSP22304 550 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 UQCRC2P22695 453 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 MYL9P24844 172 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CXCR2P25025 360 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CD27P26842 260 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 GTF2E2P29084 291 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C21orf33P30042 268 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 FGF9P31371 208 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 GDF5P43026 501 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 SELENOPP49908 381 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 UCNP55089 124 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CDH12P55289 794 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 RPS24P62847 133 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CXADRP78310 365 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CDK6Q00534 326 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CD300CQ08708 224 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 RAB40BQ12829 278 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TARDBPQ13148 414 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 LARS2Q15031 903 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 PTGES3Q15185 160 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CHRNA6Q15825 494 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CDKN3Q16667 212 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TSTQ16762 297 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TBRG1Q3YBR2 411 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 GLYR1Q49A26 553 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 YIF1BQ5BJH7 314 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C19orf54Q5BKX5 351 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 XKR6Q5GH73 641 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C3orf38Q5JPI3 329 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 MFSD4BQ5TF39 518 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TRIQKQ629K1 86 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C12orf73Q69YU5 71 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 FRMPD2BQ6IN97 320 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 REEP3Q6NUK4 255 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 MED27Q6P2C8 311 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 Q6ZVL8 140 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 GGNQ86UU5 652 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ANKRD46Q86W74 232 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CYP4Z2PQ8N1L4 340 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CFAP52Q8N1V2 620 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 NANOGP1Q8N7R0 232 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C19orf18Q8NEA5 215 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 FAM83FQ8NEG4 500 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 OR2AP1Q8NGE2 309 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 OR56A3Q8NH54 315 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CLHC1Q8NHS4 586 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ZFAND1Q8TCF1 268 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 HCAR2Q8TDS4 363 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 UTP15Q8TED0 518 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 SNX33Q8WV41 574 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 FGF11Q92914 225 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 PPCDCQ96CD2 204 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ECHDC3Q96DC8 303 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 SCRN2Q96FV2 425 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 APIPQ96GX9 242 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ST6GAL2Q96JF0 529 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 HYLS1Q96M11 299 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 KCTD7Q96MP8 289 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 QRFPRQ96P65 431 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 VPS35Q96QK1 796 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF607Q96SK3 696 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TMEM246Q9BRR3 403 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CENPOQ9BU64 300 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 POLDIP3Q9BY77 421 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 UCK2Q9BZX2 261 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 BTBD1Q9H0C5 482 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 OR51E2Q9H255 320 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 C6orf106Q9H6K1 298 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 FOLH1BQ9HBA9 442 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 BPIFA1Q9NP55 256 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 A4GALTQ9NPC4 353 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 PRDM8Q9NQV8 689 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 POLE4Q9NR33 117 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ACER3Q9NUN7 267 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ABCB8Q9NUT2 735 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 GPR83Q9NYM4 423 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF226Q9NYT6 803 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TAS2R7Q9NYW3 318 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 EMC3Q9P0I2 261 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 VPS51Q9UID3 782 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 TBC1D24Q9ULP9 559 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 ICKQ9UPZ9 632 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 POLHQ9Y253 713 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 LSM2Q9Y333 95 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 EXOSC1Q9Y3B2 195 aaKnown RBP5.52□□□□□ -1.53
VPS33B-203ENST00000554264 OR51B4Q9Y5P0 310 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 KCNE2Q9Y6J6 123 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 V9GYH0 126 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 LAMA5O15230 3695 aa5.52□□□□□ -1.53
VPS33B-203ENST00000554264 CELSR3Q9NYQ7 3312 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 A0A1B0GTQ1 180 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 GNG14A0A1W2PPG7 69 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 A0A1W2PRB8 838 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 PIPSLA2A3N6 862 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 KRT87PA6NCN2 255 aa5.51□□□□□ -1.53
VPS33B-203ENST00000554264 FABP12A6NFH5 140 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms