RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	APOOL	Q6UXV4	268 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	FAM214B	Q7L5A3	538 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	SZRD1	Q7Z422	152 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	EXOC3L1	Q86VI1	746 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	CDRT4	Q8N9R6	151 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	FBXO30	Q8TB52	745 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	SLC9A6	Q92581	669 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	GIMAP5	Q96F15	307 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	PPP3R2	Q96LZ3	170 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	MS4A4E	Q96PG1	132 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	TBL1XR1	Q9BZK7	514 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	PTGES2	Q9H7Z7	377 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	LIPT1	Q9Y234	373 aa		11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247		V9GYY5	206 aa	Predicted RBP	11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247	YLPM1	P49750	1951 aa	Known RBP	11.79	□□□□□ -0.52
RACGAP1-211	ENST00000548247		A0A096LNT2	108 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	SCAMP2	O15127	329 aa	Known RBP	11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	TYROBP	O43914	113 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	TNFRSF21	O75509	655 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	SLU7	O95391	586 aa	Known RBP	11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	ANGPTL1	O95841	491 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	BPGM	P07738	259 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	ACP2	P11117	423 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	DDX5	P17844	614 aa	Known RBP	11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	EFNA1	P20827	205 aa	Predicted RBP	11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	MAPK1	P28482	360 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	HPCAL1	P37235	193 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	PRR5	P85299	388 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	C17orf67	Q0P5P2	114 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	PON3	Q15166	354 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	GRAMD1B	Q3KR37	738 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	MFSD12	Q6NUT3	480 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	GALNT10	Q86SR1	603 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	SLC16A11	Q8NCK7	471 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	OR5M1	Q8NGP8	315 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	OR6Y1	Q8NGX8	325 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	NEUROG1	Q92886	237 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	GTPBP3	Q969Y2	492 aa	Known RBP	11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	C1GALT1C1	Q96EU7	318 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	C16orf58	Q96GQ5	468 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	C3orf30	Q96M34	536 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	TMEM109	Q9BVC6	243 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	BEX2	Q9BXY8	128 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	ATP6V1H	Q9UI12	483 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	ZDHHC2	Q9UIJ5	367 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	GDF2	Q9UK05	429 aa	Predicted RBP	11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	ZNF337	Q9Y3M9	751 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	CAD	P27708	2225 aa		11.78	□□□□□ -0.52
RACGAP1-211	ENST00000548247	PCNX3	Q9H6A9	2034 aa		11.77	□□□□□ -0.52
RACGAP1-211	ENST00000548247	IGLV3-32	A0A0A0MS00	114 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	OR2M5	A3KFT3	312 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ALG1L2	C9J202	215 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	LINC01387	J3KSC0	135 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	SEC14L5	O43304	696 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	SKAP2	O75563	359 aa	Predicted RBP	11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	AQP8	O94778	261 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	RPL3	P39023	403 aa	Known RBP	11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ETV4	P43268	484 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	CLDN20	P56880	219 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	FGFBP1	Q14512	234 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	MLC1	Q15049	377 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	DUSP5	Q16690	384 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ATP6AP1L	Q52LC2	224 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	C6orf136	Q5SQH8	315 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	IL23R	Q5VWK5	629 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ALKBH2	Q6NS38	261 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ZCCHC12	Q6PEW1	402 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	FIGNL1	Q6PIW4	674 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	OR7A2P	Q8NGA2	310 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	OR4C3	Q8NH37	302 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	FAM110B	Q8TC76	370 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	SMAP2	Q8WU79	429 aa	Predicted RBP	11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	FBXW5	Q969U6	566 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	FAM120B	Q96EK7	910 aa	Known RBP	11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	KCNK17	Q96T54	332 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	C1orf50	Q9BV19	199 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	AMBRA1	Q9C0C7	1298 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ACTR6	Q9GZN1	396 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	PLSCR4	Q9NRQ2	329 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	CLEC4A	Q9UMR7	237 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ZNF175	Q9Y473	711 aa		11.77	□□□□□ -0.53
RACGAP1-211	ENST00000548247	IGHV4-30-2	A0A087WSY4	118 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247		A0A1W2PRB8	838 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247		H3BML4	177 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	CLOCK	O15516	846 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	NDUFB5	O43674	189 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	GMFG	O60234	142 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	LYPLA1	O75608	230 aa	Predicted RBP	11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	KCNK2	O95069	426 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	OXSR1	O95747	527 aa	Predicted RBP	11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	NGFR	P08138	427 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ALOX5	P09917	674 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	LAMP1	P11279	417 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	EEFSEC	P57772	596 aa	Known RBP	11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	RUNX1T1	Q06455	604 aa		11.76	□□□□□ -0.53
RACGAP1-211	ENST00000548247	ZNF844	Q08AG5	666 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms