RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 IGHV5-10-1A0A0J9YXX1 117 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 SYNDIG1LA6NDD5 238 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 CHP2O43745 196 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ADAM11O75078 769 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ADORA3P0DMS8 318 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 RORAP35398 523 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 SYT14P1Q58G82 188 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 PLAG1Q6DJT9 500 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ZNF550Q7Z398 422 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 LSMEM1Q8N8F7 131 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 OR14A16Q8NHC5 309 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 WDR36Q8NI36 951 aaKnown RBP13.78□□□□□ -0.2
VCAN-211ENST00000513984 CRELD1Q96HD1 420 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ART5Q96L15 291 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 PRRG3Q9BZD7 231 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TRIM2Q9C040 744 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 OR8D2Q9GZM6 311 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TGIF2Q9GZN2 237 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 VN1R1Q9GZP7 353 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 FLRT3Q9NZU0 649 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 RPL36Q9Y3U8 105 aaKnown RBP13.78□□□□□ -0.2
VCAN-211ENST00000513984 MPDZO75970 2070 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 EXPH5Q8NEV8 1989 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 A0A1B0GWA3 101 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 FRG2CA6NGY1 282 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 A8MUA0 341 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 PATE3B3GLJ2 98 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 CDC42EP2O14613 210 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TLX2O43763 284 aaPredicted RBP13.78□□□□□ -0.2
VCAN-211ENST00000513984 CER1O95813 267 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 DBTP11182 482 aaKnown RBP13.78□□□□□ -0.2
VCAN-211ENST00000513984 TGFBR2P37173 567 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ZNF91Q05481 1191 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 PRKCDQ05655 676 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 DYNC1I2Q13409 638 aaKnown RBP13.78□□□□□ -0.2
VCAN-211ENST00000513984 AQP6Q13520 282 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 SNAPC1Q16533 368 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 P2RY8Q86VZ1 359 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 PLPP5Q8NEB5 264 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TMEM163Q8TC26 289 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ADIPOR1Q96A54 375 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 HS6ST2Q96MM7 605 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 NECAB3Q96P71 396 aaPredicted RBP13.78□□□□□ -0.2
VCAN-211ENST00000513984 SLC38A2Q96QD8 506 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 ZNF426Q9BUY5 554 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TBC1D23Q9NUY8 699 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 TMEM5Q9Y2B1 443 aa13.78□□□□□ -0.2
VCAN-211ENST00000513984 IGLV3-12A0A075B6K2 115 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 SERINC4A6NH21 518 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 EFCAB7A8K855 629 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 IL33O95760 270 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 PTHP01270 115 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 ADRA2AP08913 450 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 CTBP2P56545 445 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 NSDHLQ15738 373 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 KLHL26Q53HC5 615 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 SLC23A3Q6PIS1 610 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 TMPRSS11FQ6ZWK6 438 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 OR2I1PQ8NGU4 316 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 OR4C3Q8NH37 302 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 PFN4Q8NHR9 129 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 DAZLQ92904 295 aaKnown RBP13.77□□□□□ -0.21
VCAN-211ENST00000513984 LCORQ96JN0 433 aaPredicted RBP13.77□□□□□ -0.21
VCAN-211ENST00000513984 LRR1Q96L50 414 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 CCDC74BQ96LY2 380 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 LMF1Q96S06 567 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 TSSK6Q9BXA6 273 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 HOXD1Q9GZZ0 328 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 NXF5Q9H1B4 397 aaKnown RBP13.77□□□□□ -0.21
VCAN-211ENST00000513984 SLC22A11Q9NSA0 550 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 CTSFQ9UBX1 484 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.77□□□□□ -0.21
VCAN-211ENST00000513984 SLC35A3Q9Y2D2 325 aa13.77□□□□□ -0.21
VCAN-211ENST00000513984 UNC119BA6NIH7 251 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 M0R082 166 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 CKMT1AP12532 417 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 IFI30P13284 250 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 MAKP20794 623 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 ADH7P40394 386 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 RBM34P42696 430 aaKnown RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 DCAF7P61962 342 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 NCF4Q15080 339 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 CLPPQ16740 277 aaPredicted RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 TIGD6Q17RP2 521 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 PGGHGQ32M88 737 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 TRIM61Q5EBN2 209 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 ZNF367Q7RTV3 350 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 BCDIN3DQ7Z5W3 292 aaKnown RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 LAPTM4BQ86VI4 370 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 SLITRK4Q8IW52 837 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 DTWD2Q8NBA8 298 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 FAM71CQ8NEG0 241 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 BRIX1Q8TDN6 353 aaKnown RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 EFHD2Q96C19 240 aaPredicted RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 CLIP3Q96DZ5 547 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 ARSGQ96EG1 525 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms