RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 AGTR1P30556 359 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 SFTPDP35247 375 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 PTH2RP49190 550 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 RNF144AP50876 292 aaPredicted RBP10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF117Q03924 483 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 MLC1Q15049 377 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 UGT3A2Q3SY77 523 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 ARL13AQ5H913 290 aaPredicted RBP10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 PDSS1Q5T2R2 415 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 LRIG3Q6UXM1 1119 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF704Q6ZNC4 412 aaPredicted RBP10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 BEND4Q6ZU67 534 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 TRABD2AQ86V40 505 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 WFDC8Q8IUA0 241 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 LILRA2Q8N149 483 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 PHOSPHO1Q8TCT1 267 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 ROBO4Q8WZ75 1007 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 OSTF1Q92882 214 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 PPP3R2Q96LZ3 170 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 STACQ99469 402 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 BDH2Q9BUT1 245 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 MECRQ9BV79 373 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 GSX2Q9BZM3 304 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 ACTR6Q9GZN1 396 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 PIGUQ9H490 435 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 FANCFQ9NPI8 374 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 DUSP22Q9NRW4 184 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 MKS1Q9NXB0 559 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 TRAF6Q9Y4K3 522 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 SNX8Q9Y5X2 465 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 FREM1Q5H8C1 2179 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 PRR14LQ5THK1 2151 aa10.31□□□□□ -0.76
HMGCS1-204ENST00000507293 TLDC2A0PJX2 215 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 TMEM114B3SHH9 223 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 PEX11AO75192 247 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 NUDT14O95848 222 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 PLAUP00749 431 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 FGF4P08620 206 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 LAMP1P11279 417 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 ATP6V1C1P21283 382 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 ELK4P28324 431 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 MAPK1P28482 360 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 RPL3P39023 403 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 EIF1P41567 113 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF844Q08AG5 666 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 TP53BP2Q13625 1128 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF239Q16600 458 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 NDUFAF6Q330K2 333 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 XKR7Q5GH72 579 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 CDC73Q6P1J9 531 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 CBLN3Q6UW01 205 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 ZCCHC23Q6ZST2 131 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 PLEKHM3Q6ZWE6 761 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 MTERF4Q7Z6M4 381 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 STK32CQ86UX6 486 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 BANPQ8N9N5 519 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 OR2W6PQ8NHA6 318 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 RNF128Q8TEB7 428 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 ABHD3Q8WU67 409 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 IGFBPL1Q8WX77 278 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 PLPPR2Q96GM1 343 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 C1orf50Q9BV19 199 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 SRXN1Q9BYN0 137 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 SLC17A7Q9P2U7 560 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 GPR52Q9Y2T5 361 aa10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-204ENST00000507293 NSD1Q96L73 2696 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 HS3ST1O14792 307 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 EFNA2O43921 213 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 SPAG7O75391 227 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 SKAP2O75563 359 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 C6orf47O95873 294 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 NID1P14543 1247 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 PSMB1P20618 241 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 CCT3P49368 545 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 NR1H2P55055 460 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 SUMO3P55854 103 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 CARD18P57730 90 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 PTGR1Q14914 329 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 SPDYE7PQ495Y7 208 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ATP6AP1LQ52LC2 224 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 DCST2Q5T1A1 773 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ALKBH2Q6NS38 261 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 HOMEZQ8IX15 550 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF614Q8N883 585 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF527Q8NB42 609 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 OR56A1Q8NGH5 318 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 FBXO27Q8NI29 283 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ADAMTS15Q8TE58 950 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 NUDT8Q8WV74 236 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 TMEM171Q8WVE6 324 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 OR5P2Q8WZ92 322 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 CPNE4Q96A23 557 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 S100PBPQ96BU1 408 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 C3orf30Q96M34 536 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 TMEM204Q9BSN7 226 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ACTRT3Q9BYD9 372 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms