RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 RUNDC3AQ59EK9 446 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 RPS26P11Q5JNZ5 115 aaPredicted RBP7.13□□□□□ -1.27
SSR1-210ENST00000489567 CPLX4Q7Z7G2 160 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 DHDDSQ86SQ9 333 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 MTDHQ86UE4 582 aaKnown RBP7.13□□□□□ -1.27
SSR1-210ENST00000489567 SNX32Q86XE0 403 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 TREML1Q86YW5 311 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 ZNF619Q8N2I2 560 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 POU5F2Q8N7G0 328 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 OR5M1Q8NGP8 315 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 OR14L1PQ8NHC6 308 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 PHOSPHO1Q8TCT1 267 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 GIMAP1Q8WWP7 306 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 RNF166Q96A37 237 aaPredicted RBP7.13□□□□□ -1.27
SSR1-210ENST00000489567 C1GALT1C1Q96EU7 318 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 CGREF1Q99674 301 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 TIMP4Q99727 224 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 CPPED1Q9BRF8 314 aaPredicted RBP7.13□□□□□ -1.27
SSR1-210ENST00000489567 CCDC106Q9BWC9 280 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 HOXD1Q9GZZ0 328 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 C12orf49Q9H741 205 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 EXO5Q9H790 373 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 SDHAF3Q9NRP4 125 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 CARD8Q9Y2G2 431 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 L3MBTL1Q9Y468 752 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 DTNAQ9Y4J8 743 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 GMEB1Q9Y692 573 aa7.13□□□□□ -1.27
SSR1-210ENST00000489567 C15orf38-AP3S2A0A0A6YYH1 394 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 OR14I1A6ND48 311 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 SERINC4A6NH21 518 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 KDM4EB2RXH2 506 aaPredicted RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 HCRTR2O43614 444 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 GUSBP08236 651 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 NR2F1P10589 423 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 BMP2P12643 396 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 GPX2P18283 190 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 STARP49675 285 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 GFRA1P56159 465 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 DSCR4P56555 118 aaPredicted RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 MTPNP58546 118 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 NFYCQ13952 458 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 TOMM34Q15785 309 aaPredicted RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 ADRM1Q16186 407 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 REP15Q6BDI9 236 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 VASNQ6EMK4 673 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 LRRC74BQ6ZQY2 392 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 PIGWQ7Z7B1 504 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 MARVELD2Q8N4S9 558 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 FAM26EQ8N5C1 309 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 ZNF527Q8NB42 609 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 TMEM19Q96HH6 336 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 RSRC1Q96IZ7 334 aaKnown RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 ANKRD27Q96NW4 1050 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 RSPO3Q9BXY4 272 aaPredicted RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 UGT2B28Q9BY64 529 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 MYLK2Q9H1R3 596 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 RABL2AQ9UBK7 228 aaPredicted RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 P2RX2Q9UBL9 471 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.12□□□□□ -1.27
SSR1-210ENST00000489567 DKKL1Q9UK85 242 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 ACAD8Q9UKU7 415 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 ICAM5Q9UMF0 924 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 LIPT1Q9Y234 373 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 VDAC3Q9Y277 283 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 SLC5A6Q9Y289 635 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 CAPN7Q9Y6W3 813 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 MED12Q93074 2177 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 DNAJC13O75165 2243 aa7.12□□□□□ -1.27
SSR1-210ENST00000489567 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 AGAP5A6NIR3 686 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 CCL21O00585 134 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 PRRG2O14669 202 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 ADAM11O75078 769 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 AGFG2O95081 481 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 LDLRP01130 860 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 HK1P19367 917 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 RPS4Y1P22090 263 aaKnown RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 ADSLP30566 484 aaPredicted RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 ANXA11P50995 505 aaKnown RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 MNAT1P51948 309 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 TXNL4AP83876 142 aaKnown RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 FADDQ13158 208 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 SKP2Q13309 424 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 FGFBP1Q14512 234 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 TMEM44Q2T9K0 475 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.11□□□□□ -1.271e-14■■□□□ 14.5
SSR1-210ENST00000489567 NHSL2Q5HYW2 709 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 RTL6Q6ICC9 239 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 ZNF585AQ6P3V2 769 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 IFNEQ86WN2 208 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 B4GALNT2Q8NHY0 566 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 ABTB1Q969K4 478 aaPredicted RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 SARAFQ96BY9 339 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 WDYHV1Q96HA8 205 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 CCDC120Q96HB5 630 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 TREX2Q9BQ50 279 aaPredicted RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 NSRP1Q9H0G5 558 aaKnown RBP7.11□□□□□ -1.27
SSR1-210ENST00000489567 A4GALTQ9NPC4 353 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 POLE3Q9NRF9 147 aa7.11□□□□□ -1.27
SSR1-210ENST00000489567 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms