RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 OR52D1Q9H346 318 aa10.04□□□□□ -0.8
VPS52-217ENST00000478934 CCDC86Q9H6F5 360 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 MTHFD2LQ9H903 347 aaPredicted RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 LYARQ9NX58 379 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 USP36Q9P275 1121 aaKnown RBP10.04□□□□□ -0.8
VPS52-217ENST00000478934 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR6C70A6NIJ9 312 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 SMIM10L1P0DMW3 83 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 NOS3P29474 1203 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 GABRA5P31644 462 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 LBX1P52954 281 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 HCCSP53701 268 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 HYAL1Q12794 435 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ASAH1Q13510 395 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TATDN3Q17R31 274 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ZNF628Q5EBL2 1059 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TMEM91Q6ZNR0 172 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 PEX5LQ8IYB4 626 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ARIH2OSQ8N7S6 290 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ASCC1Q8N9N2 400 aaKnown RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR4N2Q8NGD1 307 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR51A7Q8NH64 312 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OSTF1Q92882 214 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TM4SF19Q96DZ7 209 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 SMIM10Q96HG1 83 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 FRMD6Q96NE9 622 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 PTCHD1Q96NR3 888 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ATF6BQ99941 703 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 WACQ9BTA9 647 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 RNF121Q9H920 327 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 GRIP1Q9Y3R0 1128 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 C12orf71A8MTZ7 269 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 SGK494L7N484 410 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 HRKO00198 91 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 STK25O00506 426 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 B3GALT2O43825 422 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 IFI30P13284 250 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 NDUFV2P19404 249 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 STAT5AP42229 794 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR1Q1Q15612 314 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ALG11Q2TAA5 492 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ARHGAP11BQ3KRB8 267 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 EOGTQ5NDL2 527 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 DCST2Q5T1A1 773 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TRIQKQ629K1 86 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 RPTNQ6XPR3 784 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ASB18Q6ZVZ8 466 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 CXXC5Q7LFL8 322 aaKnown RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 VWA5B2Q8N398 1253 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR2T33Q8NG76 320 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 MRGPRX1Q96LB2 322 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 RNF32Q9H0A6 362 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR51V1Q9H2C8 321 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ACTR10Q9NZ32 417 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 PILRAQ9UKJ1 303 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ITGB1BP2Q9UKP3 347 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 GSTK1Q9Y2Q3 226 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 EXOSC1Q9Y3B2 195 aaKnown RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 SLC22A7Q9Y694 548 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 SLCO1B1Q9Y6L6 691 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 A0A1W2PPK0 400 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ANKRD34BA5PLL1 514 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 A6NCN8 305 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 HMX3A6NHT5 357 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 FAM25AB3EWG3 89 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 FAM25CB3EWG5 89 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 FAM25GB3EWG6 89 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 CPNE3O75131 537 aaKnown RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 CDC123O75794 336 aaPredicted RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 IL9P15248 144 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ZNF24P17028 368 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TYRP1P17643 537 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 GABRA3P34903 492 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 DDOSTP39656 456 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 OR10A3P58181 314 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 NFATC4Q14934 902 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 CDK10Q15131 360 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 IDNKQ5T6J7 187 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 FHL5Q5TD97 284 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 PRAMEF8Q5VWM4 474 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 PRAMEF7Q5VXH5 474 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 C19orf18Q8NEA5 215 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 LILRB4Q8NHJ6 448 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 PTP4A1Q93096 173 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ELSPBP1Q96BH3 223 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 UPRTQ96BW1 309 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 WDR92Q96MX6 357 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 IL21RQ9HBE5 538 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 SIDT1Q9NXL6 827 aaKnown RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 CLDND1Q9NY35 253 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 MAT2BQ9NZL9 334 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TNFRSF10DQ9UBN6 386 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 ALG5Q9Y673 324 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 CDH10Q9Y6N8 788 aa10.03□□□□□ -0.8
VPS52-217ENST00000478934 TDRD6O60522 2096 aaKnown RBP10.03□□□□□ -0.8
VPS52-217ENST00000478934 CACNA1IQ9P0X4 2223 aa10.02□□□□□ -0.8
VPS52-217ENST00000478934 A0A0G2JMP0 313 aa10.02□□□□□ -0.81
VPS52-217ENST00000478934 A0A0X1KG70 313 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms