RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PPIAL4GP0DN37 164 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 CLUP10909 449 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 HNRNPA2B1P22626 353 aaKnown RBP3.88□□□□□ -1.79
LSM5-209ENST00000468872 CA8P35219 290 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 MAGEA5P43359 124 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 ERVPABLB-1P60509 514 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 PUDPQ08623 228 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 CAMK4Q16566 473 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 ZNF239Q16600 458 aaKnown RBP3.88□□□□□ -1.79
LSM5-209ENST00000468872 CYP51A1Q16850 503 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 ARL6IP6Q8N6S5 226 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 ADAMTS16Q8TE57 1224 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 TRIM44Q96DX7 344 aaPredicted RBP3.88□□□□□ -1.79
LSM5-209ENST00000468872 VPS39Q96JC1 886 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 SLC30A2Q9BRI3 323 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 ERP44Q9BS26 406 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 OPN3Q9H1Y3 402 aaPredicted RBP3.88□□□□□ -1.79
LSM5-209ENST00000468872 SLC7A10Q9NS82 523 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 SENP1Q9P0U3 644 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 ANAPC7Q9UJX3 599 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 GLI3P10071 1580 aa3.88□□□□□ -1.79
LSM5-209ENST00000468872 STX7O15400 261 aaKnown RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 B3GAT3O94766 335 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 IGF1P05019 195 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 BCKDHAP12694 445 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 ATP6V1C1P21283 382 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 PTBP1P26599 531 aaKnown RBP eCLIP3.87□□□□□ -1.79
LSM5-209ENST00000468872 CDH5P33151 784 aaPredicted RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 BDKRB1P46663 353 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 RPL34P49207 117 aaKnown RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 RPL8P62917 257 aaKnown RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 NTHL1P78549 312 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 PEX6Q13608 980 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 DPYSL3Q14195 570 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 ATXN7L3Q14CW9 347 aaPredicted RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 TIMM50Q3ZCQ8 353 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 FAM120AOSQ5T036 256 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 MEDAGQ5VYS4 303 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 RNLSQ5VYX0 342 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 SERINC5Q86VE9 423 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 P2RY8Q86VZ1 359 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 PPP1R16AQ96I34 528 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 TMEM117Q9H0C3 514 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 AATFQ9NY61 560 aaKnown RBP eCLIP3.87□□□□□ -1.79
LSM5-209ENST00000468872 MRPL39Q9NYK5 338 aaKnown RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 EHFQ9NZC4 300 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 CICQ96RK0 1608 aaPredicted RBP3.87□□□□□ -1.79
LSM5-209ENST00000468872 PNPLA6Q8IY17 1366 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 SPHKAPQ2M3C7 1700 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 USP6P35125 1406 aa3.87□□□□□ -1.79
LSM5-209ENST00000468872 VCANP13611 3396 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 AGLP35573 1532 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 A0A1W2PQ72 361 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 A8MX80 341 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 PPIAL4DF5H284 164 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 ZSCAN12O43309 604 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 OR1F1O43749 312 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 TBX19O60806 448 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 TSC22D2O75157 780 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 SLC35E2P0CK97 266 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 PSMA2P25787 234 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 PSMA5P28066 241 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 PTGER3P43115 390 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 MAGEA9P43362 315 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 PJVKQ0ZLH3 352 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 Q1RN00 199 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 C15orf32Q32M92 178 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 ANKDD1AQ495B1 522 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 DCST2Q5T1A1 773 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 SCYL2Q6P3W7 929 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 LRRC70Q7Z2Q7 622 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 IFNEQ86WN2 208 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 TMEM17Q86X19 198 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 Q8N9G6 341 aaPredicted RBP3.86□□□□□ -1.79
LSM5-209ENST00000468872 ZSCAN4Q8NAM6 433 aaPredicted RBP3.86□□□□□ -1.79
LSM5-209ENST00000468872 TYMSOSQ8TAI1 123 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 CNIH3Q8TBE1 160 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 TFB1MQ8WVM0 346 aaKnown RBP3.86□□□□□ -1.79
LSM5-209ENST00000468872 RMND5AQ9H871 391 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.86□□□□□ -1.79
LSM5-209ENST00000468872 GSTK1Q9Y2Q3 226 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 UNC80Q8N2C7 3258 aa3.86□□□□□ -1.79
LSM5-209ENST00000468872 DEPDC5O75140 1603 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 NUP188Q5SRE5 1749 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 FRG2CA6NGY1 282 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 SAGE2PA6NJ88 616 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 A8MUI8 341 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 FAM220BPB1ANY3 271 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 BCL2L11O43521 198 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 TRIM3O75382 744 aaPredicted RBP3.85□□□□□ -1.79
LSM5-209ENST00000468872 IQCF3P0C7M6 154 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 CPN1P15169 458 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 NT5EP21589 574 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 IL2RGP31785 369 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 IFNAR2P48551 515 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 LIM2P55344 173 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 CXCL6P80162 114 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 RGS1Q08116 209 aa3.85□□□□□ -1.79
LSM5-209ENST00000468872 ZNF154Q13106 437 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms