RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TRAM1Q15629 374 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 PYCR3Q53H96 274 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ARTNQ5T4W7 220 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 OTUD1Q5VV17 481 aaPredicted RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 LYPLAL1Q5VWZ2 237 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ALKBH2Q6NS38 261 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 FIGNL1Q6PIW4 674 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 PRSS55Q6UWB4 352 aaPredicted RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SLC29A4Q7RTT9 530 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 BCDIN3DQ7Z5W3 292 aaKnown RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ZNF227Q86WZ6 799 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 TRAPPC5Q8IUR0 188 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CHAC2Q8WUX2 184 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 MEGF10Q96KG7 1140 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SLC35G5Q96KT7 338 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 C20orf85Q9H1P6 137 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ATG5Q9H1Y0 275 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 POPDC3Q9HBV1 291 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 GAR1Q9NY12 217 aaKnown RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 EXO1Q9UQ84 846 aaKnown RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SPAG17Q6Q759 2223 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 TRAV18A0A075B6X5 111 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 GXYLT2A0PJZ3 443 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 OR5K3A6NET4 321 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 MAGEB4O15481 346 aaPredicted RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 MED6O75586 246 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ABLIM3O94929 683 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CKMP06732 381 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ELK1P19419 428 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CD9P21926 228 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 PTAFRP25105 342 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CSF2RBP32927 897 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 PPM1AP35813 382 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 AKR1C3P42330 323 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SSR2P43308 183 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 RFX2P48378 723 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 LSSP48449 732 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 DNASE1L1P49184 302 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ST3GAL3Q11203 375 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 PCBP2Q15366 365 aaKnown RBP eCLIP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CDNFQ49AH0 187 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SPIN4Q56A73 249 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 KIAA0319Q5VV43 1072 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 FAM180BQ6P0A1 224 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 C1orf94Q6P1W5 598 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SERPINA11Q86U17 422 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 MRPL41Q8IXM3 137 aaKnown RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 TEX26Q8N6G2 289 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 TEX19Q8NA77 164 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 OR7D4Q8NG98 312 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 BRIX1Q8TDN6 353 aaKnown RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ELP5Q8TE02 316 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 RNF141Q8WVD5 230 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 EGLN2Q96KS0 407 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CXorf58Q96LI9 332 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 NIPSNAP1Q9BPW8 284 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 KATNB1Q9BVA0 655 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 TNFRSF12AQ9NP84 129 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 CRTAC1Q9NQ79 661 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 ACSS1Q9NUB1 689 aaPredicted RBP5.51□□□□□ -1.53
HDAC9-203ENST00000406072 FBXL21Q9UKT6 434 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 SCML1Q9UN30 329 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 COL4A2P08572 1712 aa5.51□□□□□ -1.53
HDAC9-203ENST00000406072 A0A0B4J203 849 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 A0A0B4J2A0 478 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 MEIS3P1A6NDR6 274 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 K7EPK0 472 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 ACOT7O00154 380 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 PRRG1O14668 218 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 NPC1O15118 1278 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 AHSA1O95433 338 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 SCGB1D1O95968 90 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 HIST1H2ABP04908 130 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 PET100P0DJ07 73 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 AHCYP23526 432 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 SHC1P29353 583 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 GNALP38405 381 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 MAP3K8P41279 467 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 YBEYP58557 167 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-203ENST00000406072 RAB40BQ12829 278 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 HYAL2Q12891 473 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 PIN1Q13526 163 aaPredicted RBP5.5□□□□□ -1.53
HDAC9-203ENST00000406072 ARFRP1Q13795 201 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 MFSD13AQ14CX5 517 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 SLC39A12Q504Y0 691 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 TIGD5Q53EQ6 642 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 ACSM3Q53FZ2 586 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 FAM171A1Q5VUB5 890 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 OR5M10Q6IEU7 315 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 FIP1L1Q6UN15 594 aaKnown RBP5.5□□□□□ -1.53
HDAC9-203ENST00000406072 TMEM205Q6UW68 189 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 HIST3H2AQ7L7L0 130 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 PRSS45Q7RTY3 260 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 TIPARPQ7Z3E1 657 aaKnown RBP5.5□□□□□ -1.53
HDAC9-203ENST00000406072 ATCAYQ86WG3 371 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 CBLN2Q8IUK8 224 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 SLC39A11Q8N1S5 342 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 KDM8Q8N371 416 aa5.5□□□□□ -1.53
HDAC9-203ENST00000406072 JAGN1Q8N5M9 183 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms