RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CLIP3Q96DZ5 547 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SIDT1Q9NXL6 827 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FLRT3Q9NZU0 649 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 LSM2Q9Y333 95 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FRYLO94915 3013 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 A0A0B4J2E0 115 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 A0A1B0GWA3 101 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 A0A1B0GX12 115 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 UNC119BA6NIH7 251 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 A8MUA0 341 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SURF4O15260 269 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PRKNO60260 465 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DSG2Q14126 1118 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 FGFBP1Q14512 234 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 TSTQ16762 297 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DGUOKQ16854 277 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 PGGHGQ32M88 737 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 HSDL2Q6YN16 418 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 MED25Q71SY5 747 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 ZNF321PQ8N8H1 164 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR2T33Q8NG76 320 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR52I1Q8NGK6 324 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR4C3Q8NH37 302 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 OR51E2Q9H255 320 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 HHATLQ9HCP6 504 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 SERTAD3Q9UJW9 196 aa13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 DIMT1Q9UNQ2 313 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP1-202ENST00000346416 IGKV3D-11A0A0A0MRZ8 115 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LOC100506127A0A0U1RQW1 187 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TTC36A6NLP5 189 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CHP2O43745 196 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CSO75390 466 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZGLP1P0C6A0 271 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MSL3P1P0C860 447 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 EPHA8P29322 1005 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC37A1P57057 533 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PRKCDQ05655 676 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SPHARQ15513 63 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RNLSQ5VYX0 342 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PMS2CLQ68D20 193 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PAQR6Q6TCH4 344 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 QSOX2Q6ZRP7 698 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KMT5CQ86Y97 462 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMEM151BQ8IW70 566 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 NANOGP1Q8N7R0 232 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZSCAN1Q8NBB4 408 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR7G1Q8NGA0 311 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BORCS5Q969J3 196 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BPIFA2Q96DR5 249 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PLEKHA8Q96JA3 519 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LMF1Q96S06 567 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MND1Q9BWT6 205 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DCSTAMPQ9H295 470 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 UBQLN3Q9H347 655 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF304Q9HCX3 659 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MEPEQ9NQ76 525 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FGF21Q9NSA1 209 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MED31Q9Y3C7 131 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PMF1-BGLAPU3KQ54 211 aa13.02□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KDM4EB2RXH2 506 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CCRL2O00421 344 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 RAB36O95755 333 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MTNR1AP48039 350 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 GAS1P54826 345 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PSMD4P55036 377 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FXYD6P3P58550 94 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 KLHL22Q53GT1 634 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 VWA2Q5GFL6 755 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 C1orf189Q5VU69 101 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TMPRSS11FQ6ZWK6 438 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ADCK1Q86TW2 530 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CDK20Q8IZL9 346 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 SLC15A4Q8N697 577 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 LSMEM1Q8N8F7 131 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 PROKR2Q8NFJ6 384 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FANK1Q8TC84 345 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 BRIX1Q8TDN6 353 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF501Q96CX3 271 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OPALINQ96PE5 141 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TAPBPLQ9BX59 468 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 TRIM2Q9C040 744 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OR8D2Q9GZM6 311 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 FSCN3Q9NQT6 498 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 MRPS18AQ9NVS2 196 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 CLCA3PQ9Y6N3 262 aa13.01□□□□□ -0.33
CDK5RAP1-202ENST00000346416 DSCR3O14972 297 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms