RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PAQR3Q6TCH7 311 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 LCTLQ6UWM7 567 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 PRSS48Q7RTY5 328 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 SLC38A8A6NNN8 435 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 NIPSNAP2O75323 286 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 UPK1BO75841 260 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 IL2RGP31785 369 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 TNFSF9P41273 254 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 FAM46AQ96IP4 442 aaKnown RBP16.71■□□□□ 0.26
SMAD4-201ENST00000342988 SLC2A13Q96QE2 648 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 ALG8Q9BVK2 526 aa16.71■□□□□ 0.26
SMAD4-201ENST00000342988 ANKUB1A6NFN9 424 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 SOCS5O75159 536 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 CDK5Q00535 292 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 TICAM1Q8IUC6 712 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 DIO2Q92813 273 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 TRIB3Q96RU7 358 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 ACSS1Q9NUB1 689 aaPredicted RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 CILPO75339 1184 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 ENPP1P22413 925 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 OR1E2P47887 323 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 PLD6Q8N2A8 252 aaKnown RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 OR2M3Q8NG83 312 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 FBXL20Q96IG2 436 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 SOX7Q9BT81 388 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 LRRC30A6NM36 301 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 MRPL38Q96DV4 380 aaKnown RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 CSKP41240 450 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 VARS2Q5ST30 1063 aaKnown RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 OR51A7Q8NH64 312 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 LIPHQ8WWY8 451 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 FUBP3Q96I24 572 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■□□□ 12.2
SMAD4-201ENST00000342988 ASGR2P07307 311 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 UBE2G1P62253 170 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 EPGNQ6UW88 154 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 FAM43BQ6ZT52 329 aaPredicted RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 PLXDC1Q8IUK5 500 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 OR14L1PQ8NHC6 308 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 PCED1BQ96HM7 432 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 SEZ6LQ9BYH1 1024 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 NLKQ9UBE8 527 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 PCDHGA9Q9Y5G4 932 aaKnown RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 EPOP01588 193 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 GKP32189 559 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
SMAD4-201ENST00000342988 ARNT2Q9HBZ2 717 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 COQ4Q9Y3A0 265 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 SLC22A7Q9Y694 548 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
SMAD4-201ENST00000342988 ARHGAP33O14559 1287 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 MBP02144 154 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 DRD5P21918 477 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 UFM1P61960 85 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 SLC14A2Q15849 920 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 BIDP55957 195 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 FKBP1AP62942 108 aaKnown RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 DHRS11Q6UWP2 260 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 DYNLRB1Q9NP97 96 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 PURGQ9UJV8 347 aaKnown RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 GIPRP48546 466 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 HADHBP55084 474 aaKnown RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CAMK2BQ13554 666 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 SIRPB2Q5JXA9 342 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 ASPGQ86U10 573 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 TSPYL5Q86VY4 417 aaPredicted RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 MYADMQ96S97 322 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 B3GNT5Q9BYG0 378 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 AGXT2Q9BYV1 514 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 DECR2Q9NUI1 292 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 LRCH4O75427 683 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 C8orf89P0DMQ9 161 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 OR52P1PQ8NH57 321 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 PPM1HQ9ULR3 514 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CKMT1AP12532 417 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 BTN1A1Q13410 526 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 COTL1Q14019 142 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 LRRC28Q86X40 367 aaPredicted RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CATSPERDQ86XM0 798 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 ZBTB8AQ96BR9 441 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 YLPM1P49750 1951 aaKnown RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 ITGB8P26012 769 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CLCNKBP51801 687 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 SHEQ5VZ18 495 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 LCN10Q6JVE6 187 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 FAM213BQ8TBF2 198 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 ECHDC3Q96DC8 303 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 ARPC5LQ9BPX5 153 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 MVB12BQ9H7P6 319 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 EHFQ9NZC4 300 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CLCF1Q9UBD9 225 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 ADAM12O43184 909 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 C8AP07357 584 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 GSTP1P09211 210 aaKnown RBP16.69■□□□□ 0.26
SMAD4-201ENST00000342988 CD48P09326 243 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 GRPRP30550 384 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 BMXP51813 675 aa16.69■□□□□ 0.26
SMAD4-201ENST00000342988 Q6ZRG5 221 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms