RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CDCA4Q9BXL8 241 aa14.27□□□□□ -0.13
MBD1-203ENST00000339998 DUSP15Q9H1R2 295 aaPredicted RBP14.27□□□□□ -0.13
MBD1-203ENST00000339998 UCK1Q9HA47 277 aa14.27□□□□□ -0.13
MBD1-203ENST00000339998 YARS2Q9Y2Z4 477 aaKnown RBP14.27□□□□□ -0.13
MBD1-203ENST00000339998 IGHV3-20A0A0C4DH32 117 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 A0A1B0GWA3 101 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 SOCS6O14544 535 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 KLF4O43474 513 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 ACAA2P42765 397 aaKnown RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 GCGRP47871 477 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 EIPR1Q53HC9 387 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 SLC36A4Q6YBV0 504 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 ZNF620Q6ZNG0 422 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 LHFPL3Q86UP9 236 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 GHDCQ8N2G8 530 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 FAM26EQ8N5C1 309 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 BCORP1Q8N888 145 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 ZNF615Q8N8J6 731 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 ZSCAN1Q8NBB4 408 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 ANKK1Q8NFD2 765 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 TMEM80Q96HE8 168 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 OPALINQ96PE5 141 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 GAL3ST4Q96RP7 486 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 DNAJB12Q9NXW2 375 aaKnown RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 CLCA3PQ9Y6N3 262 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 TTC28Q96AY4 2481 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 SLC22A1O15245 554 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 OIP5O43482 229 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 NUDT21O43809 227 aaKnown RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 COQ9O75208 318 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 GSTM3P21266 225 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 WDR45BQ5MNZ6 344 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 TMEM201Q5SNT2 666 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 ZNF574Q6ZN55 896 aaPredicted RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 PIGKQ92643 395 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 LMF2Q9BU23 707 aaKnown RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 OR52D1Q9H346 318 aa14.26□□□□□ -0.13
MBD1-203ENST00000339998 EXOSC4Q9NPD3 245 aaKnown RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 SIDT1Q9NXL6 827 aaKnown RBP14.26□□□□□ -0.13
MBD1-203ENST00000339998 SAGP10523 405 aaPredicted RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 GLB1P16278 677 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 FPR3P25089 353 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 TGM4P49221 684 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 IGLV3-21P80748 117 aaPredicted RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 TCTE1Q5JU00 501 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 PERM1Q5SV97 790 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 LIPKQ5VXJ0 399 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 ADCK1Q86TW2 530 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 IGFN1Q86VF2 1251 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 TMEM163Q8TC26 289 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 RNFT2Q96EX2 444 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 NXF5Q9H1B4 397 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 IL20Q9NYY1 176 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 CNOT2Q9NZN8 540 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 CTSFQ9UBX1 484 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 ZNF223Q9UK11 482 aaPredicted RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 RPL36Q9Y3U8 105 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 SMIM30A4D0T7 59 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 DUX1O43812 170 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 IFNGR2P38484 337 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 GAS1P54826 345 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 FAM69BQ5VUD6 431 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 ZCCHC12Q6PEW1 402 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 APOOLQ6UXV4 268 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 C16orf47Q6ZP98 133 aaPredicted RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 LANCL3Q6ZV70 420 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 LRRC17Q8N6Y2 441 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 SLC38A9Q8NBW4 561 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 TRUB1Q8WWH5 349 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 SH3YL1Q96HL8 342 aaPredicted RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 DPYSL5Q9BPU6 564 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 RTN4RQ9BZR6 473 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 UBQLN3Q9H347 655 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 HINT3Q9NQE9 182 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 FGF21Q9NSA1 209 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 EPHA6Q9UF33 1036 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 FBXL4Q9UKA2 621 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 CBLCQ9ULV8 474 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 GPX5O75715 221 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 TIAF1O95411 115 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 DRD5P21918 477 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 OCLNQ16625 522 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 MOGQ16653 247 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 LYSMD4Q5XG99 296 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 CBLN3Q6UW01 205 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 KIRREL2Q6UWL6 708 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 MED25Q71SY5 747 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 ATCAYQ86WG3 371 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 CPOQ8IVL8 374 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 CYB561A3Q8NBI2 242 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 GATAD2BQ8WXI9 593 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 BPIFA2Q96DR5 249 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 POLR2J2Q9GZM3 115 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 SLIRPQ9GZT3 109 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 PCED1AQ9H1Q7 454 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 PLGRKTQ9HBL7 147 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 Q9N2J8 555 aa14.25□□□□□ -0.13
MBD1-203ENST00000339998 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
MBD1-203ENST00000339998 SURF4O15260 269 aa14.24□□□□□ -0.13
MBD1-203ENST00000339998 MRPS14O60783 128 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms