RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 MT-ND5P03915 603 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 EIF2DP41214 584 aaKnown RBP10.26□□□□□ -0.77
TOP3A-201ENST00000321105 RPS27P42677 84 aaKnown RBP10.26□□□□□ -0.77
TOP3A-201ENST00000321105 CBLBQ13191 982 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 SEC23BQ15437 767 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 ZNF619Q8N2I2 560 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 OR4N2Q8NGD1 307 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 DEFB126Q9BYW3 111 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 FN3KQ9H479 309 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 FGF21Q9NSA1 209 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 OBP2AQ9NY56 170 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 LAMP5Q9UJQ1 280 aa10.26□□□□□ -0.77
TOP3A-201ENST00000321105 SH3PXD2BA1X283 911 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 FAM25EA8MYX2 175 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 PLRG1O43660 514 aaKnown RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ITIH1P19827 911 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 GABARAPL2P60520 117 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 MEDAGQ5VYS4 303 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ZNF367Q7RTV3 350 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ZNF550Q7Z398 422 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 SERPINA12Q8IW75 414 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 CRIPAKQ8N1N5 446 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 EID2Q8N6I1 236 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 SPRYD4Q8WW59 207 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 DIO2Q92813 273 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 G6PC3Q9BUM1 346 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 UBE2ZQ9H832 354 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 TAS2R7Q9NYW3 318 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 EXTL2Q9UBQ6 330 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 PLCL2Q9UPR0 1127 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 PADI2Q9Y2J8 665 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 OXSR1O95747 527 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 IGHA2P01877 340 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ALDH3B2P48448 385 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 DNASE1L1P49184 302 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 TUBA1BP68363 451 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ZFP69Q49AA0 526 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 CCBE1Q6UXH8 406 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 TUBA1AQ71U36 451 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 TP53I13Q8NBR0 393 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 PFN4Q8NHR9 129 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 RHOXF1Q8NHV9 184 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 HS6ST2Q96MM7 605 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 MMP27Q9H306 513 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 FBRSQ9HAH7 460 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 TMEFF2Q9UIK5 374 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ZNF646O15015 1829 aaPredicted RBP10.25□□□□□ -0.77
TOP3A-201ENST00000321105 MYO16Q9Y6X6 1858 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 P2RX6O15547 441 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 ADAM23O75077 832 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 DNAJB5O75953 348 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 CLEC2LP0C7M8 214 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 CXCR4P61073 352 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 GALK2Q01415 458 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 SNTA1Q13424 505 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 LCN1P1Q5VSP4 162 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 TMEM225Q6GV28 225 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 PGBD2Q6P3X8 592 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 RPTNQ6XPR3 784 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 KRT77Q7Z794 578 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 CRB3Q9BUF7 120 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 FSCN3Q9NQT6 498 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 FBXO34Q9NWN3 711 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 LOC285556D6RIA3 1793 aa10.25□□□□□ -0.77
TOP3A-201ENST00000321105 CUL9Q8IWT3 2517 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 FAM172BPA6NC97 362 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 C9J4A7 227 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SPINT1O43278 529 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 PRAMEF2O60811 474 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 ATP6V1G1O75348 118 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 ITGAMP11215 1152 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 PRKCAP17252 672 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 RORAP35398 523 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 HCCSP53701 268 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 GP2P55259 537 aaKnown RBP10.24□□□□□ -0.77
TOP3A-201ENST00000321105 YPEL5P62699 121 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 BTBD16Q32M84 506 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 GALNTL5Q7Z4T8 443 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 TANKQ92844 425 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SENP5Q96HI0 755 aaPredicted RBP10.24□□□□□ -0.77
TOP3A-201ENST00000321105 TMEM38AQ9H6F2 299 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 UCKL1Q9NWZ5 548 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SLC6A14Q9UN76 642 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SPTBN1Q01082 2364 aaKnown RBP10.24□□□□□ -0.77
TOP3A-201ENST00000321105 POLR1CO15160 346 aaPredicted RBP10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SLC16A6O15403 523 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SEC14L5O43304 696 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 TRIM23P36406 574 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 SLC35A2P78381 396 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 OR2I1PQ8NGU4 316 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 ZFPM2Q8WW38 1151 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 NUDT22Q9BRQ3 303 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 ALG8Q9BVK2 526 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 CUTCQ9NTM9 273 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 ANKRD10Q9NXR5 420 aa10.24□□□□□ -0.77
TOP3A-201ENST00000321105 HSPE1-MOB4S4R3N1 261 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms