RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 GJD3Q8N144 294 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 FLVCR1-AS1Q8TAF5 88 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 DEPDC7Q96QD5 511 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 TMEM106CQ9BVX2 250 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 OR2B2Q9GZK3 357 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 OR6C74A6NCV1 312 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 UNC119BA6NIH7 251 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 FAM25AB3EWG3 89 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 FAM25CB3EWG5 89 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 FAM25GB3EWG6 89 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 EVX1P49640 407 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 Q5BKY6 102 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 ALG8Q9BVK2 526 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 TEX12Q9BXU0 123 aa23.73■■□□□ 1.39
RAB40C-201ENST00000248139 GXYLT2A0PJZ3 443 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 MAGEB4O15481 346 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-201ENST00000248139 CT62P0C5K7 136 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 PAICSP22234 425 aaKnown RBP23.72■■□□□ 1.39
RAB40C-201ENST00000248139 SHC1P29353 583 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 FCRL6Q6DN72 434 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 DNAJA4Q8WW22 397 aaPredicted RBP23.72■■□□□ 1.39
RAB40C-201ENST00000248139 TMEM246Q9BRR3 403 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 YIPF2Q9BWQ6 316 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 ANKRD19PQ9H560 264 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 RFPL3O75679 317 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 UGT2B7P16662 529 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 TSFMP43897 325 aaKnown RBP23.72■■□□□ 1.39
RAB40C-201ENST00000248139 DCST2Q5T1A1 773 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 ARL9Q6T311 187 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 WACQ9BTA9 647 aa23.72■■□□□ 1.39
RAB40C-201ENST00000248139 GTPBP1O00178 669 aaKnown RBP23.71■■□□□ 1.39
RAB40C-201ENST00000248139 ELK1P19419 428 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 OR10A3P58181 314 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 QPRTQ15274 297 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 TATDN3Q17R31 274 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 TMEM239Q8WW34 195 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 PTP4A1Q93096 173 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 GFM1Q96RP9 751 aaKnown RBP23.71■■□□□ 1.39
RAB40C-201ENST00000248139 RBCK1Q9BYM8 510 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 CACYBPQ9HB71 228 aaKnown RBP23.71■■□□□ 1.39
RAB40C-201ENST00000248139 CLDND1Q9NY35 253 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 A0A0G2JMP0 313 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 A0A0X1KG70 313 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 RNF13O43567 381 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 B3GALT2O43825 422 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 SAGP10523 405 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-201ENST00000248139 SDHBP21912 280 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 MAP2K3P46734 347 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 LSSP48449 732 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 E2F1Q01094 437 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 SUZ12Q15022 739 aaKnown RBP23.71■■□□□ 1.39
RAB40C-201ENST00000248139 NIPAL3Q6P499 406 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 PLET1Q6UQ28 207 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 ACBD7Q8N6N7 88 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 COX18Q8N8Q8 333 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 OR4M2Q8NGB6 313 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 IFT27Q9BW83 186 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 OBP2AQ9NY56 170 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 MAT2BQ9NZL9 334 aa23.71■■□□□ 1.39
RAB40C-201ENST00000248139 A0A1W2PQF6 199 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.7■■□□□ 1.39
RAB40C-201ENST00000248139 GNB5O14775 395 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 CTSBP07858 339 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 EN2P19622 333 aaPredicted RBP23.7■■□□□ 1.39
RAB40C-201ENST00000248139 ACSL1P33121 698 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 HCCSP53701 268 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 SHC2P98077 582 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 PLAURQ03405 335 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 SLC3A1Q07837 685 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 GPR18Q14330 331 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 FIGLAQ6QHK4 219 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 GALNT6Q8NCL4 622 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 CD180Q99467 661 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 ZNF223Q9UK11 482 aaPredicted RBP23.7■■□□□ 1.39
RAB40C-201ENST00000248139 NOX1Q9Y5S8 564 aa23.7■■□□□ 1.39
RAB40C-201ENST00000248139 HCRTR1O43613 425 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 IL9P15248 144 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 PPP1CAP62136 330 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 ZNF542PQ5EBM4 170 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 SLC37A3Q8NCC5 494 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 FAM3CQ92520 227 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 PTCHD1Q96NR3 888 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 SOSTQ9BQB4 213 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 EVA1BQ9NVM1 165 aa23.7■■□□□ 1.38
RAB40C-201ENST00000248139 A0A1W2PPK0 400 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 TRAPPC13A5PLN9 417 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 J3QRE1 110 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 BHLHE40O14503 412 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 HMGN1P05114 100 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 RPS5P46782 204 aaKnown RBP23.69■■□□□ 1.38
RAB40C-201ENST00000248139 DUSP8Q13202 625 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 NUDT18Q6ZVK8 323 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 RANBP3LQ86VV4 465 aaPredicted RBP23.69■■□□□ 1.38
RAB40C-201ENST00000248139 OR52N1Q8NH53 320 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 UPRTQ96BW1 309 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 BMFQ96LC9 184 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 HS6ST2Q96MM7 605 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 CCDC86Q9H6F5 360 aaKnown RBP23.69■■□□□ 1.38
RAB40C-201ENST00000248139 CLEC4AQ9UMR7 237 aa23.69■■□□□ 1.38
RAB40C-201ENST00000248139 HEBP2Q9Y5Z4 205 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms