RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CAPN3P20807 821 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 DRD4P21917 467 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 DPP4P27487 766 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 PTGER4P35408 488 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ADH7P40394 386 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 GAS1P54826 345 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 DSTNP60981 165 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 KLF10Q13118 480 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 MRPL49Q13405 166 aaKnown RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 NFYCQ13952 458 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 GPR68Q15743 365 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ZNF141Q15928 474 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 FNDC7Q5VTL7 733 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 PRAMEF8Q5VWM4 474 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 C1QL3Q5VWW1 255 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 PRAMEF7Q5VXH5 474 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 DESI1Q6ICB0 168 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 TMEM211Q6ICI0 200 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 CGB2Q6NT52 195 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ENPP6Q6UWR7 440 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 Q6ZPB1 254 aaPredicted RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 EIF3MQ7L2H7 374 aaKnown RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 CMIPQ8IY22 773 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 PEX5LQ8IYB4 626 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 PM20D2Q8IYS1 436 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ZNF619Q8N2I2 560 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 OR14L1PQ8NHC6 308 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 RAB8BQ92930 207 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 RELTQ969Z4 430 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 OTUB1Q96FW1 271 aaPredicted RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 PIGQQ9BRB3 760 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 THUMPD3Q9BV44 507 aaKnown RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ZNF350Q9GZX5 532 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 TSPAN10Q9H1Z9 355 aaPredicted RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 TAS2R10Q9NYW0 307 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 SUCOQ9UBS9 1254 aaKnown RBP9.65□□□□□ -0.86
TMEM260-206ENST00000555046 DKKL1Q9UK85 242 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 SLC35A3Q9Y2D2 325 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ARL2BPQ9Y2Y0 163 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 ESPL1Q14674 2120 aa9.65□□□□□ -0.86
TMEM260-206ENST00000555046 POLEQ07864 2286 aa9.65□□□□□ -0.87
TMEM260-206ENST00000555046 TACC2O95359 2948 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 A0A0G2JPF8 293 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 LOC100653049A0A140TA62 436 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 SERINC4A6NH21 518 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 FIGNL2A6NMB9 653 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 HNRNPCL2B2RXH8 293 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 HNRNPCL3B7ZW38 293 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 NDUFAB1O14561 156 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 HCRTR2O43614 444 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 HNRNPCL1O60812 293 aaKnown RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 KRT34O76011 436 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 AGFG2O95081 481 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 HNRNPCL4P0DMR1 293 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 GPX2P18283 190 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 SLC6A2P23975 617 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 CHMP24386 653 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 EIF1P41567 113 aaKnown RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 ZNF41P51814 821 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 GYS2P54840 703 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 CASP9P55211 416 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 SUMO3P55854 103 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 EEFSECP57772 596 aaKnown RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 SF3A3Q12874 501 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 GXYLT1Q4G148 440 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 RUNDC3AQ59EK9 446 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 NHSL2Q5HYW2 709 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 PAGE3Q5JUK9 113 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 GKAP1Q5VSY0 366 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 OR5M10Q6IEU7 315 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 DLEU7Q6UYE1 221 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 MTDHQ86UE4 582 aaKnown RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 IFNEQ86WN2 208 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 FADS6Q8N9I5 356 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 TOR1AIP2Q8NFQ8 470 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 B4GALNT2Q8NHY0 566 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 PHOSPHO1Q8TCT1 267 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 ABTB1Q969K4 478 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 RNF166Q96A37 237 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 CGREF1Q99674 301 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 SPATA5L1Q9BVQ7 753 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 TP63Q9H3D4 680 aaPredicted RBP9.64□□□□□ -0.87
TMEM260-206ENST00000555046 DSN1Q9H410 356 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 EFCAB1Q9HAE3 211 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 A4GALTQ9NPC4 353 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 FBXO34Q9NWN3 711 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 FAM53CQ9NYF3 392 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 MED11Q9P086 117 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 MKLN1Q9UL63 735 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 IFT52Q9Y366 437 aa9.64□□□□□ -0.87
TMEM260-206ENST00000555046 C15orf38-AP3S2A0A0A6YYH1 394 aa9.63□□□□□ -0.87
TMEM260-206ENST00000555046 WIPF3A6NGB9 483 aa9.63□□□□□ -0.87
TMEM260-206ENST00000555046 NPIPA2E9PIF3 369 aa9.63□□□□□ -0.87
TMEM260-206ENST00000555046 E9PLN8 166 aa9.63□□□□□ -0.87
TMEM260-206ENST00000555046 NPIPB9F8W1W9 429 aa9.63□□□□□ -0.87
TMEM260-206ENST00000555046 NPIPA3F8WFD2 350 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms