RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 KIRREL3Q8IZU9 778 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 GTPBP8Q8N3Z3 284 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 OR7A2PQ8NGA2 310 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 OR56A1Q8NGH5 318 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 AGR3Q8TD06 166 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 FIG4Q92562 907 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 TUBGCP3Q96CW5 907 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 PGM2Q96G03 612 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 C16orf58Q96GQ5 468 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 SLC39A3Q9BRY0 314 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 PINK1Q9BXM7 581 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 ACTRT3Q9BYD9 372 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 BHLHE41Q9C0J9 482 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 MED4Q9NPJ6 270 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 ASIC5Q9NY37 505 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-207ENST00000527189 PCNX3Q9H6A9 2034 aa12.06□□□□□ -0.48
CAPN1-207ENST00000527189 H0YC42 278 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 TM9SF1O15321 606 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 SEC14L5O43304 696 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 CGAP01215 116 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 CD79BP40259 229 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 EIF1P41567 113 aaKnown RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 ZNF41P51814 821 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 TPD52P55327 224 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 RAC1P63000 192 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 CASP8Q14790 479 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 LASP1Q14847 261 aaKnown RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 PON3Q15166 354 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 GUSBP1Q15486 140 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 BTLAQ7Z6A9 289 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 CROCCP2Q86T23 111 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 GGNQ86UU5 652 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 CNEP1R1Q8N9A8 125 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 ZNF527Q8NB42 609 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 OR5M1Q8NGP8 315 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 PPP1R14CQ8TAE6 165 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 FNDC9Q8TBE3 224 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 SFXN5Q8TD22 340 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 ADAMTS15Q8TE58 950 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 JADE3Q92613 823 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 ZNF845Q96IR2 970 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 ALPK1Q96QP1 1244 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 LIME1Q9H400 295 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 GLRX2Q9NS18 164 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 NOP53Q9NZM5 478 aaKnown RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 FAF1Q9UNN5 650 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-207ENST00000527189 VDAC3Q9Y277 283 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 SNX8Q9Y5X2 465 aa12.05□□□□□ -0.48
CAPN1-207ENST00000527189 ABCA4P78363 2273 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 AKAP6Q13023 2319 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 DUXAA6NLW8 204 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 H3BNH8 94 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ADAMDEC1O15204 470 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 RGS16O15492 202 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-207ENST00000527189 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPN1-207ENST00000527189 RAF1P04049 648 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 HRGP04196 525 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 SERPINE1P05121 402 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 MYZAPP0CAP1 466 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 IL11P20809 199 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ATP6V1C1P21283 382 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 PSMA4P25789 261 aaKnown RBP12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ADH6P28332 368 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 CLDN8P56748 225 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 FAM27E3Q08E93 113 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 KRT71Q3SY84 523 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 PDSS1Q5T2R2 415 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 GTF2IRD2BQ6EKJ0 949 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 VWA1Q6PCB0 445 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ESPNLQ6ZVH7 1005 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ZAR1Q86SH2 424 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 GTF2IRD2Q86UP8 949 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 LRRC34Q8IZ02 419 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 FBXO30Q8TB52 745 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 C1orf50Q9BV19 199 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 DUSP26Q9BV47 211 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 PRRG4Q9BZD6 226 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 PLSCR4Q9NRQ2 329 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 MED17Q9NVC6 651 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 GPATCH2Q9NW75 528 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 FBXO34Q9NWN3 711 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ZNF226Q9NYT6 803 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 GIMAP2Q9UG22 337 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 MCTS1Q9ULC4 181 aaKnown RBP12.04□□□□□ -0.48
CAPN1-207ENST00000527189 ACTL7BQ9Y614 415 aa12.04□□□□□ -0.48
CAPN1-207ENST00000527189 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
CAPN1-207ENST00000527189 EIF1AYO14602 144 aaKnown RBP12.03□□□□□ -0.48
CAPN1-207ENST00000527189 SKAP2O75563 359 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-207ENST00000527189 C6orf47O95873 294 aa12.03□□□□□ -0.48
CAPN1-207ENST00000527189 G6PDP11413 515 aa12.03□□□□□ -0.48
CAPN1-207ENST00000527189 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-207ENST00000527189 ME2P23368 584 aa12.03□□□□□ -0.48
CAPN1-207ENST00000527189 CPOXP36551 454 aa12.03□□□□□ -0.48
CAPN1-207ENST00000527189 EIF1AXP47813 144 aaKnown RBP12.03□□□□□ -0.48
CAPN1-207ENST00000527189 ATP12AP54707 1039 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms