RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CASKO14936 926 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 FAM189A1O60320 539 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 MED6O75586 246 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 UFL1O94874 794 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 AKR7A3O95154 331 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 AREGP15514 252 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 XRCC1P18887 633 aaPredicted RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 NOVA1P51513 510 aaKnown RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 MTTPP55157 894 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 KIAA1024LP59773 190 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 KRTAP12-4P60329 112 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 PRPS1P60891 318 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 GALK2Q01415 458 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 FUT11Q495W5 492 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 AGKQ53H12 422 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 TOR1AIP1Q5JTV8 583 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 KPRPQ5T749 579 aaPredicted RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 ATF7IP2Q5U623 682 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 UNQ9370/PRO34162Q6UXP9 181 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 ACP7Q6ZNF0 438 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 NET1Q7Z628 596 aaPredicted RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM110Q86TL2 294 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 RNF182Q8N6D2 247 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 ARFGAP2Q8N6H7 521 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 LPCAT1Q8NF37 534 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 WDR36Q8NI36 951 aaKnown RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 GDAP1Q8TB36 358 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 ST7LQ8TDW4 575 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 FAM151AQ8WW52 585 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 OR1E3Q8WZA6 343 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 FAM213AQ9BRX8 229 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 NMNAT2Q9BZQ4 307 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 ZDHHC11Q9H8X9 412 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 UTP6Q9NYH9 597 aaKnown RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 WDR45Q9Y484 360 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 WIF1Q9Y5W5 379 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 BRWD3Q6RI45 1802 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 DHX29Q7Z478 1369 aaKnown RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 OTOGLQ3ZCN5 2332 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 IGHV3-64DA0A0J9YX35 117 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 LOC100131303A0A0U1RQF7 123 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 SMIM28A0A1B0GU29 152 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 TTC26A0AVF1 554 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 FBLL1A6NHQ2 334 aaKnown RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 GFYI3L273 518 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 NBR2O15453 112 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 OR10H3O60404 316 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 TGDSO95455 350 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 KLF8O95600 359 aaPredicted RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 SLC25A27O95847 323 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 SLC35G4P0C7Q5 338 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 IGFBP3P17936 291 aaPredicted RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 TSPAN8P19075 237 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 NTSP30990 170 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 OTX2P32243 289 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 CTNNA1P35221 906 aaKnown RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 CRISP3P54108 245 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 RND3P61587 244 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 IL9RQ01113 521 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 PKN2Q16513 984 aaKnown RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 SYPL1Q16563 259 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 CYBRD1Q53TN4 286 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 GLRA4Q5JXX5 417 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 OR52W1Q6IF63 320 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 ARSKQ6UWY0 536 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 C1orf186Q6ZWK4 172 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 GOLGA7Q7Z5G4 137 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 SKA3Q8IX90 412 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 LRRC17Q8N6Y2 441 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF709Q8N972 641 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 COLGALT1Q8NBJ5 622 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 DUSP18Q8NEJ0 188 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 TRUB1Q8WWH5 349 aaKnown RBP1.09□□□□□ -2.23
PDGFC-208ENST00000512711 DTD2Q96FN9 168 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 SPATA13Q96N96 652 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 ADPGKQ9BRR6 497 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM245Q9H330 911 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 TERF2IPQ9NYB0 399 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 PLA2G4CQ9UP65 541 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 GMPPBQ9Y5P6 360 aa1.09□□□□□ -2.23
PDGFC-208ENST00000512711 MAP3K15Q6ZN16 1313 aa1.09□□□□□ -2.24
PDGFC-208ENST00000512711 A0A0G2JRQ6 117 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 PSMA7O14818 248 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 ADAM12O43184 909 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 MOSP00540 346 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 OAS2P29728 719 aaKnown RBP1.08□□□□□ -2.24
PDGFC-208ENST00000512711 DLSTP36957 453 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 HTR5AP47898 357 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 SLC6A8P48029 635 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 CSNK1DP48730 415 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 HNRNPFP52597 415 aaKnown RBP1.08□□□□□ -2.24
PDGFC-208ENST00000512711 CSNK1G2P78368 415 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 TFDP1Q14186 410 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 SLMAPQ14BN4 828 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 SF3A2Q15428 464 aaKnown RBP1.08□□□□□ -2.24
PDGFC-208ENST00000512711 NSDHLQ15738 373 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 HFEQ30201 348 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 PVRIGQ6DKI7 326 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 ARMCX2Q7L311 632 aa1.08□□□□□ -2.24
PDGFC-208ENST00000512711 P4HA3Q7Z4N8 544 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms