RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TFAP2EQ6VUC0 442 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 BEND4Q6ZU67 534 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 IL17RELQ6ZVW7 336 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 OR2L13Q8N349 312 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 OR10H5Q8NGA6 315 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 PIWIL2Q8TC59 973 aaKnown RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 ABHD3Q8WU67 409 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 HTRA1Q92743 480 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 OSTF1Q92882 214 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 GFM2Q969S9 779 aaKnown RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 ADAD1Q96M93 576 aaKnown RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 KCNA7Q96RP8 456 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 NAPGQ99747 312 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 LMF2Q9BU23 707 aaKnown RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 EBPLQ9BY08 206 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 SRXN1Q9BYN0 137 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 PRRG4Q9BZD6 226 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ADAM19Q9H013 955 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 STMN4Q9H169 189 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 OR10A4Q9H209 315 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 PTGES2Q9H7Z7 377 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 SDHAF3Q9NRP4 125 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ZDHHC18Q9NUE0 388 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 FAIMQ9NVQ4 179 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 ING1Q9UK53 422 aaPredicted RBP8.27□□□□□ -1.09
VCL-204ENST00000472585 SNX6Q9UNH7 406 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 TIMM22Q9Y584 194 aa8.27□□□□□ -1.09
VCL-204ENST00000472585 GNG14A0A1W2PPG7 69 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 A0A1W2PRB8 838 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 ESYT3A0FGR9 886 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 OIP5O43482 229 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 TCF21O43680 179 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 ADAP00813 363 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 COL6A2P12110 1019 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 FCGR2AP12318 317 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 SLC25A16P16260 332 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 ADH6P28332 368 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 GABRA3P34903 492 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 MPIP34949 423 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 PAFAH1B1P43034 410 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 SERPINB8P50452 374 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 NCBP2P52298 156 aaKnown RBP eCLIP8.26□□□□□ -1.09
VCL-204ENST00000472585 RAC1P63000 192 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 IRX1P78414 480 aaPredicted RBP8.26□□□□□ -1.09
VCL-204ENST00000472585 CLCQ05315 142 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 BTKQ06187 659 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 C17orf67Q0P5P2 114 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 C2orf80Q0P641 193 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 DECR1Q16698 335 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 FAM120AOSQ5T036 256 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 SFRP5Q5T4F7 317 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 CPTPQ5TA50 214 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 FAM71E1Q6IPT2 247 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 FAM166AQ6J272 317 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 GALNT18Q6P9A2 607 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 DTX2Q86UW9 622 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 STK32CQ86UX6 486 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 LSRQ86X29 649 aaPredicted RBP8.26□□□□□ -1.09
VCL-204ENST00000472585 MEX3DQ86XN8 651 aaKnown RBP8.26□□□□□ -1.09
VCL-204ENST00000472585 TUSC5Q8IXB3 177 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 FAM9CQ8IZT9 166 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 GTPBP8Q8N3Z3 284 aaPredicted RBP8.26□□□□□ -1.09
VCL-204ENST00000472585 GATSQ8NAP1 163 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 OR2V1Q8NHB1 315 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 SGMS2Q8NHU3 365 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 HOXB13Q92826 284 aaPredicted RBP8.26□□□□□ -1.09
VCL-204ENST00000472585 ZMYND19Q96E35 227 aaPredicted RBP8.26□□□□□ -1.09
VCL-204ENST00000472585 ELP4Q96EB1 424 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 RNF145Q96MT1 663 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 AMDHD1Q96NU7 426 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 MED17Q9NVC6 651 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 TAS2R7Q9NYW3 318 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 NINJ2Q9NZG7 142 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 NPAP1Q9NZP6 1156 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 SNX8Q9Y5X2 465 aa8.26□□□□□ -1.09
VCL-204ENST00000472585 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 ALG1L2C9J202 215 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 KIAA0513O60268 411 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 SMIM24O75264 130 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 ANXA4P09525 319 aaPredicted RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 LINGO3P0C6S8 592 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 IGHV4-31P0DP07 118 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 HSD3B1P14060 373 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 DDCP20711 480 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 IGFBP5P24593 272 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 HSD3B2P26439 372 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 TIA1P31483 386 aaKnown RBP eCLIP8.25□□□□□ -1.09
VCL-204ENST00000472585 GZMKP49863 264 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 MANFP55145 182 aaKnown RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 FOXA1P55317 472 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 PSPHP78330 225 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 MRPS22P82650 360 aaKnown RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 SLC7A5Q01650 507 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 SLC18A2Q05940 514 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 CD226Q15762 336 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 PLPPR5Q32ZL2 321 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 C11orf71Q6IPW1 123 aa8.25□□□□□ -1.09
VCL-204ENST00000472585 ZNF551Q7Z340 670 aaPredicted RBP8.25□□□□□ -1.09
VCL-204ENST00000472585 WDR75Q8IWA0 830 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms