RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 OR2W5A6NFC9 320 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 URADA6NGE7 173 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 BBIP1A8MTZ0 92 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NPIPA5E9PKD4 350 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TXNDC9O14530 226 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CHST10O43529 356 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 B3GALT2O43825 422 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FGF17O60258 216 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 B4GALT2O60909 372 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ALOX12BO75342 701 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DNAJC8O75937 253 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ATP5HO75947 161 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR2B3O76000 313 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NSA2O95478 260 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 C6orf47O95873 294 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 HPP00738 406 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 IL6P05231 212 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CPN2P22792 545 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 SLC6A2P23975 617 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 S100A3P33764 101 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PTGER1P34995 402 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 HPCAL1P37235 193 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FRKP42685 505 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 GSTM5P46439 218 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR1D4P47884 311 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ALDH9A1P49189 494 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NUDT2P50583 147 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DLX5P56178 289 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 RAB38P57729 211 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FOXL2P58012 376 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PSME3P61289 254 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PMP22Q01453 160 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TNFRSF17Q02223 184 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ACTN3Q08043 901 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TGM3Q08188 693 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 STX5Q13190 355 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 GAB1Q13480 694 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NFYCQ13952 458 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FAM53BQ14153 422 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 GRM7Q14831 915 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DAZAP2Q15038 168 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NDUFA9Q16795 377 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NKAIN1Q4KMZ8 207 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF766Q5HY98 468 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 COQ5Q5HYK3 327 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TCTE1Q5JU00 501 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CPTPQ5TA50 214 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 C1orf189Q5VU69 101 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 GARNL3Q5VVW2 1013 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 RHBDD2Q6NTF9 364 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 SLC48A1Q6P1K1 146 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 HACD2Q6Y1H2 254 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 COX15Q7KZN9 410 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ABHD13Q7L211 337 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF551Q7Z340 670 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DHDDSQ86SQ9 333 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 GPR180Q86V85 440 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CXorf67Q86X51 503 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR4N5Q8IXE1 308 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DEFB107AQ8IZN7 70 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PGAM4Q8N0Y7 254 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CLEC4FQ8N1N0 589 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 C10orf111Q8N326 155 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DPP10Q8N608 796 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TTC29Q8NA56 475 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FAM98AQ8NCA5 519 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR11G2Q8NGC1 345 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR8J2Q8NGG1 315 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FAM57AQ8TBR7 257 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 N4BP2L2Q92802 583 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PIGTQ969N2 578 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 FKBP10Q96AY3 582 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 EXOSC8Q96B26 276 aaKnown RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ANKRD9Q96BM1 317 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PPCDCQ96CD2 204 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 LRRC58Q96CX6 371 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 MTERF3Q96E29 417 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ZMYND19Q96E35 227 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CNRIP1Q96F85 164 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 LRRC46Q96FV0 321 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF764Q96H86 408 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CLPTM1LQ96KA5 538 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF681Q96N22 645 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CCDC115Q96NT0 180 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR52E6Q96RD3 313 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ZBTB18Q99592 522 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CPPED1Q9BRF8 314 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 CENPKQ9BS16 269 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 BTBD10Q9BSF8 475 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TUBB6Q9BUF5 446 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 DUSP26Q9BV47 211 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 NPLQ9BXD5 320 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 ROGDIQ9GZN7 287 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 C1orf21Q9H246 121 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TP63Q9H3D4 680 aaPredicted RBP4.38□□□□□ -1.71
PTPN4-206ENST00000441089 GLIPR2Q9H4G4 154 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 IKZF5Q9H5V7 419 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 PLEKHF2Q9H8W4 249 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 WDR54Q9H977 334 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 COPS7BQ9H9Q2 264 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms