RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 HCAR1Q9BXC0 346 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 SRMSQ9H3Y6 488 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 TRPV4Q9HBA0 871 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 ADAP2Q9NPF8 381 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 FBXO34Q9NWN3 711 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 OBP2AQ9NY56 170 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 NTMQ9P121 344 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 PTGFRNQ9P2B2 879 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 NLKQ9UBE8 527 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 NOX1Q9Y5S8 564 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 HEBP2Q9Y5Z4 205 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 SYNDIG1LA6NDD5 238 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 UNC119BA6NIH7 251 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 PLRG1O43660 514 aaKnown RBP10.98□□□□□ -0.65
CD44-209ENST00000433892 CTSVO60911 334 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 AGR2O95994 175 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 CA3P07451 260 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 MAKP20794 623 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 HTR2AP28223 471 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 ADPRHP54922 357 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 DUSP8Q13202 625 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 KLHL12Q53G59 568 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 NOXA1Q86UR1 476 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 ACBD7Q8N6N7 88 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 TMEM99Q8N816 258 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 LILRB4Q8NHJ6 448 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 FANK1Q8TC84 345 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 PHOSPHO2Q8TCD6 241 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 OR2M4Q96R27 311 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 ALG8Q9BVK2 526 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 SFXN1Q9H9B4 322 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 RBFOX1Q9NWB1 397 aaKnown RBP10.98□□□□□ -0.65
CD44-209ENST00000433892 ASB6Q9NWX5 421 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 SIDT1Q9NXL6 827 aaKnown RBP10.98□□□□□ -0.65
CD44-209ENST00000433892 ZNF624Q9P2J8 865 aaPredicted RBP10.98□□□□□ -0.65
CD44-209ENST00000433892 KLF15Q9UIH9 416 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 POLHQ9Y253 713 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 CA5BQ9Y2D0 317 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 F5P12259 2224 aa10.98□□□□□ -0.65
CD44-209ENST00000433892 FAM240BA0A1B0GVZ2 78 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 FAM25AB3EWG3 89 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 FAM25CB3EWG5 89 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 FAM25GB3EWG6 89 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 H0Y8X5 98 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 GTPBP1O00178 669 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 PEX12O00623 359 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 LYRM1O43325 122 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 RNF13O43567 381 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 REM1O75628 298 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 CHRNB1P11230 501 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 GDI1P31150 447 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 MLLT3P42568 568 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 PPP2CBP62714 309 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 PPP2CAP67775 309 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 MRPL2Q5T653 305 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 IDNKQ5T6J7 187 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 NIPAL3Q6P499 406 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 MZT2AQ6P582 158 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 RANBP3LQ86VV4 465 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 DTX3Q8N9I9 347 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 TOR1AIP2Q8NFQ8 470 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 OR1E3Q8WZA6 343 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 HERVK_113Q902F9 699 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 CD180Q99467 661 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 TIMP4Q99727 224 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 GDF15Q99988 308 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 TMEM43Q9BTV4 400 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 PPIL3Q9H2H8 161 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 KRCC1Q9NPI7 259 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 BABAM2Q9NXR7 383 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 KCNE5Q9UJ90 142 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 PCDHGB7Q9Y5F8 929 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 TRAPPC13A5PLN9 417 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 LRRC72A6NJI9 287 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 LDB3O75112 727 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 PRKAR1AP10644 381 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 IFI30P13284 250 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 CPMP14384 443 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 ELK1P19419 428 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 TBXA2RP21731 343 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 INPP1P49441 399 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 SLC16A1P53985 500 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 CSTF1Q05048 431 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 SUZ12Q15022 739 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 OR1Q1Q15612 314 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 CCDC85BQ15834 202 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 EIPR1Q53HC9 387 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 Q5BKY6 102 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 FCRLBQ6BAA4 426 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 FAM109BQ6ICB4 259 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 MZT2BQ6NZ67 158 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 METAP1DQ6UB28 335 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 MEPCEQ7L2J0 689 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 GID4Q8IVV7 300 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 OR10H4Q8NGA5 316 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 OR52L1Q8NGH7 329 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 NT5CQ8TCD5 201 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms