RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZNF28P17035 718 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 AVPR1AP37288 418 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 NDUFA6P56556 154 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 OR2B8PP59922 312 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FMO1Q01740 532 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 EN1Q05925 392 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 EXOSC2Q13868 293 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF684Q5T5D7 378 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 HIST2H3PS2Q5TEC6 136 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 OR8G2PQ6IF36 304 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 DHRS4L2Q6PKH6 230 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SLC39A5Q6ZMH5 540 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 DEFB107AQ8IZN7 70 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 METTL13Q8N6R0 699 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 YIPF7Q8N8F6 280 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 OR7G2Q8NG99 324 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CD200R1Q8TD46 325 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SLC35C1Q96A29 364 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 ESAMQ96AP7 390 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PINX1Q96BK5 328 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 C14orf79Q96F83 325 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SMARCD1Q96GM5 515 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 F2RL3Q96RI0 385 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TP53RKQ96S44 253 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SLC39A8Q9C0K1 460 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 MEGF9Q9H1U4 602 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SLC38A1Q9H2H9 487 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CDC42EP4Q9H3Q1 356 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 UBE2ZQ9H832 354 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 GPATCH2Q9NW75 528 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SMOXQ9NWM0 555 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TAS2R14Q9NYV8 317 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PURGQ9UJV8 347 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TCOF1Q13428 1488 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 MYH9P35579 1960 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TCRBV16S1A1N1A0A5B0 115 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 A6NIZ1 184 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 M0R233 179 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FFAR3O14843 346 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 EREGO14944 169 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SIGLEC5O15389 551 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 GPR42O15529 346 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 UCHL3P15374 230 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PSMD8P48556 350 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 RBPJQ06330 500 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 NOL9Q5SY16 702 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CST9LP1Q5W188 147 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 LCLAT1Q6UWP7 414 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 LANCL3Q6ZV70 420 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FAM183BPQ6ZVS7 135 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 GAREM2Q75VX8 874 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TRIM46Q7Z4K8 759 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PEG10Q86TG7 708 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FOXP4Q8IVH2 680 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 GPALPP1Q8IXQ4 340 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 MFSD9Q8NBP5 474 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 OR4C15Q8NGM1 316 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SLC35G5Q96KT7 338 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FCRL1Q96LA6 429 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 ZNF641Q96N77 438 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 OR6C1Q96RD1 312 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 MYOCQ99972 504 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 RSPO3Q9BXY4 272 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SPRTNQ9H040 489 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CRISPLD1Q9H336 500 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FAM83DQ9H4H8 585 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PCIF1Q9H4Z3 704 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 NSUN3Q9H649 340 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PTGES2Q9H7Z7 377 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM184CQ9NVA4 438 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 KCMF1Q9P0J7 381 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 KCTD3Q9Y597 815 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PLA2R1Q13018 1463 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 P2RY10O00398 339 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 AGPAT2O15120 278 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SNNO75324 88 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FADS2O95864 444 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 DDAH2O95865 285 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 C6orf47O95873 294 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 HOXD8P13378 290 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 LAMP2P13473 410 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 BMP6P22004 513 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PRKACGP22612 351 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TEAD1P28347 426 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CEACAM6P40199 344 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 MPLP40238 635 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FRKP42685 505 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 SLC6A12P48065 614 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 CDK8P49336 464 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 PSMD5Q16401 504 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 EXOC3L2Q2M3D2 409 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 ZXDCQ2QGD7 858 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 FAM109BQ6ICB4 259 aaPredicted RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 TMEM211Q6ICI0 200 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 ARL9Q6T311 187 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 C16orf89Q6UX73 402 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 DHRSXQ8N5I4 330 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 ITFG1Q8TB96 612 aa5.03□□□□□ -1.6
PTPN4-203ENST00000430976 RNASEH2CQ8TDP1 164 aaKnown RBP5.03□□□□□ -1.6
PTPN4-203ENST00000430976 GLMPQ8WWB7 406 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms