RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 GGNQ86UU5 652 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 NUDCD3Q8IVD9 361 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 OR56A1Q8NGH5 318 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 PSMA8Q8TAA3 256 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 COQ8BQ96D53 544 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 C1orf50Q9BV19 199 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 ACTRT3Q9BYD9 372 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 PRRG4Q9BZD6 226 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 HOXD1Q9GZZ0 328 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 OPN3Q9H1Y3 402 aaPredicted RBP15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 PROCRQ9UNN8 238 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 ITPR3Q14573 2671 aa15.81■□□□□ 0.12
PDLIM2-208ENST00000416159 C7orf72A4D263 438 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 EIF1AYO14602 144 aaKnown RBP15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 SKAP2O75563 359 aaPredicted RBP15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 CGAP01215 116 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 POU2F1P14859 743 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 PRPS1L1P21108 318 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 ATP6V1C1P21283 382 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 ETV4P43268 484 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 EIF1AXP47813 144 aaKnown RBP15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 RAC1P63000 192 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 PTGR1Q14914 329 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 POU4F3Q15319 338 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 GUSBP1Q15486 140 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 DEFB113Q30KQ7 82 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 B4GALNT2Q8NHY0 566 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 PPP1R14CQ8TAE6 165 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 ADAMTS15Q8TE58 950 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 CDS1Q92903 461 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 MOAP1Q96BY2 351 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 TUBGCP3Q96CW5 907 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 OTUB1Q96FW1 271 aaPredicted RBP15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 WFIKKN1Q96NZ8 548 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 MED17Q9NVC6 651 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF226Q9NYT6 803 aa15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 FAF1Q9UNN5 650 aaPredicted RBP15.8■□□□□ 0.12
PDLIM2-208ENST00000416159 CTIFO43310 598 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 AQP8O94778 261 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 C6orf47O95873 294 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 KLK2P20151 261 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 KCNJ5P48544 419 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 TP53BP2Q13625 1128 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 PLPPR5Q32ZL2 321 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 SPDYE7PQ495Y7 208 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 PDSS1Q5T2R2 415 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 FAM214BQ7L5A3 538 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 RIMKLAQ8IXN7 391 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF610Q8N9Z0 462 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 OR10D3Q8NH80 312 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 SFXN5Q8TD22 340 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 SH3YL1Q96HL8 342 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 ZIM3Q96PE6 472 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 BHLHE41Q9C0J9 482 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 CXorf36Q9H7Y0 433 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 NEUROD4Q9HD90 331 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 MCTS1Q9ULC4 181 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 EMC9Q9Y3B6 208 aa15.79■□□□□ 0.12
PDLIM2-208ENST00000416159 UQCRHLA0A096LP55 91 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 C16orf97H3BN30 126 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 ADAMDEC1O15204 470 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 CFLARO15519 480 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 SYNGR4O95473 234 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 ME2P23368 584 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 PSMA4P25789 261 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 UGT2B10P36537 528 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 EIF1P41567 113 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 EMX2Q04743 252 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 CD226Q15762 336 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 SMU1Q2TAY7 513 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 PPP4R4Q6NUP7 873 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 BHLHB9Q6PI77 547 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 ESPNLQ6ZVH7 1005 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 MREGQ8N565 214 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 KRTCAP2Q8N6L1 136 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 ZNF527Q8NB42 609 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 PHOSPHO1Q8TCT1 267 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 GMPPAQ96IJ6 420 aaPredicted RBP15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 ADGRG7Q96K78 797 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 RNF145Q96MT1 663 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 MED18Q9BUE0 208 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 DUSP26Q9BV47 211 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 PLSCR4Q9NRQ2 329 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 GLRX2Q9NS18 164 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 GPATCH2Q9NW75 528 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 KLHL28Q9NXS3 571 aa15.78■□□□□ 0.12
PDLIM2-208ENST00000416159 A0A1W2PPR1 153 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 H3BNH8 94 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 CXCL13O43927 109 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 PLGP00747 810 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 G6PDP11413 515 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 IL11P20809 199 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 SLC6A8P48029 635 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 CTBP2P56545 445 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 CLDN8P56748 225 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 C21orf58P58505 322 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 CTU2Q2VPK5 515 aaKnown RBP15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 KRT71Q3SY84 523 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 DCST2Q5T1A1 773 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms