RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
CD44-206ENST00000415148 MFSD9Q8NBP5 474 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 OR8H1Q8NGG4 311 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 ADAMTS15Q8TE58 950 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 SUSD6Q92537 303 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 SLC35A4Q96G79 324 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 TIMM29Q9BSF4 260 aa9.13□□□□□ -0.95
CD44-206ENST00000415148 IGLON5A6NGN9 336 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 CHP2O43745 196 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 NOS1APO75052 506 aaPredicted RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 EIF4EP06730 217 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 CXCL3P19876 107 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PAICSP22234 425 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 RBMS1P29558 406 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 MC3RP41968 323 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 OR10A3P58181 314 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 MESP2Q0VG99 397 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 GALEQ14376 348 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 ARHGAP11BQ3KRB8 267 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 EIPR1Q53HC9 387 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 C18orf63Q68DL7 685 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 RPL13AP3Q6NVV1 102 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 ANKRD54Q6NXT1 300 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 CPOQ8IVL8 374 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 ZNF296Q8WUU4 475 aaPredicted RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 MACROD1Q9BQ69 325 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 RNF208Q9H0X6 261 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 UBQLN3Q9H347 655 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 ZFP64Q9NPA5 681 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 HINT3Q9NQE9 182 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 EVA1BQ9NVM1 165 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 EXTL2Q9UBQ6 330 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 ZNF443Q9Y2A4 671 aaPredicted RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 MRPS23Q9Y3D9 190 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 NUMA1Q14980 2115 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 VCANP13611 3396 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PRR23AA6NEV1 266 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 ANTXRLA6NF34 631 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 FAM183AA6NL82 134 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 C4orf51C9J302 202 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 SOCS6O14544 535 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PLPP2O43688 288 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 THY1P04216 161 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 THBS1P07996 1170 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 C8orf89P0DMQ9 161 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 CCL5P13501 91 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 NPR2P20594 1047 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 GPR4P46093 362 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PITPNBP48739 271 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 RIPPLY1Q0D2K3 151 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 DUSP8Q13202 625 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 GAB4Q2WGN9 574 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PUS10Q3MIT2 529 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 PLA1AQ53H76 456 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 IDNKQ5T6J7 187 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 OAFQ86UD1 273 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 GPALPP1Q8IXQ4 340 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 HDDC3Q8N4P3 179 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 OR2L3Q8NG85 312 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 OR6C4Q8NGE1 309 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 OR9A2Q8NGT5 310 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 SMAP2Q8WU79 429 aaPredicted RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 ING5Q8WYH8 240 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 RFT1Q96AA3 541 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 SAMD8Q96LT4 415 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 SMAD5Q99717 465 aaKnown RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 DHRS9Q9BPW9 319 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 THAP7Q9BT49 309 aaPredicted RBP9.12□□□□□ -0.95
CD44-206ENST00000415148 HEXA-AS1Q9H8Q6 139 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 SLC6A20Q9NP91 592 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 TRIM36Q9NQ86 728 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PRSS16Q9NQE7 514 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 PRDM9Q9NQV7 894 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 STMN3Q9NZ72 180 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 INSL6Q9Y581 213 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 CSNK1G3Q9Y6M4 447 aa9.12□□□□□ -0.95
CD44-206ENST00000415148 UNC119BA6NIH7 251 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 PIP5K1CO60331 668 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 FCMRO60667 390 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 DHFRP00374 187 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 AHCYP23526 432 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 CMPK1P30085 196 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 ACSL1P33121 698 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 GCGRP47871 477 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 PDX1P52945 283 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 TAS2R43P59537 309 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 KRT33BQ14525 404 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 POU4F3Q15319 338 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 HSD17B12Q53GQ0 312 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 ESCO2Q56NI9 601 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 MFSD12Q6NUT3 480 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 NIPAL3Q6P499 406 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 FRRS1Q6ZNA5 592 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 RANBP3LQ86VV4 465 aaPredicted RBP9.11□□□□□ -0.95
CD44-206ENST00000415148 FAM20CQ8IXL6 584 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 GPR135Q8IZ08 494 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 SIRT6Q8N6T7 355 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 TEX19Q8NA77 164 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 TMEM255BQ8WV15 326 aa9.11□□□□□ -0.95
CD44-206ENST00000415148 PHF21AQ96BD5 680 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms