RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CCR2P41597 374 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 RAD52P43351 418 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 TBPL1P62380 186 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 CDK5Q00535 292 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 HBMQ6B0K9 141 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 TMEM88Q6PEY1 159 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 ADAMTS14Q8WXS8 1223 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 WDR34Q96EX3 536 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 COPZ2Q9P299 210 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 RPS6KB2Q9UBS0 482 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 PFDN2Q9UHV9 154 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 EXOSC1Q9Y3B2 195 aaKnown RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 ASB4Q9Y574 426 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 VCANP13611 3396 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 FOXE1O00358 373 aaPredicted RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 RNF13O43567 381 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 HYAL3O43820 417 aaPredicted RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 SLC28A2O43868 658 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 UCHL1P09936 223 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 GNSP15586 552 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 PBLDP30039 288 aaPredicted RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 ACVR1BP36896 505 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 RECQLP46063 649 aaPredicted RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 SNTB2Q13425 540 aaKnown RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 SLBPQ14493 270 aaKnown RBP eCLIP13.16□□□□□ -0.3
SF1-201ENST00000227503 MINDY4Q4G0A6 757 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 TMEM220Q6QAJ8 160 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 SMARCD3Q6STE5 483 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 LINC00469Q8N7U9 141 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 UXS1Q8NBZ7 420 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 BVESQ8NE79 360 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 TEX47Q8TBZ9 253 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 EVA1AQ9H8M9 152 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 DMRT3Q9NQL9 472 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 NTMQ9P121 344 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 TAAR2Q9P1P5 351 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 OR2W5A6NFC9 320 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 ARPC1BO15143 372 aaKnown RBP13.15□□□□□ -0.3
SF1-201ENST00000227503 IGF2P01344 180 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.33e-17■□□□□ 10.3
SF1-201ENST00000227503 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
SF1-201ENST00000227503 MAPK9P45984 424 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 PNLIPRP1P54315 467 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 EFNB1P98172 346 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 HTR4Q13639 388 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 FAM71E1Q6IPT2 247 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 KRT78Q8N1N4 520 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 SORCS1Q8WY21 1168 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 NRTNQ99748 197 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 ZNF649Q9BS31 505 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 MIEF1Q9NQG6 463 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.15□□□□□ -0.3
SF1-201ENST00000227503 ZNF69Q9UC07 566 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 NTNG1Q9Y2I2 539 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 OR5K4A6NMS3 321 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 RAB3AP20336 220 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 TRIM23P36406 574 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 ERVK-25P63136 954 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 ZNF613Q6PF04 617 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 WNT2BQ93097 391 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 ORAI1Q96D31 301 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 LRRC46Q96FV0 321 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 TEFMQ96QE5 360 aaKnown RBP13.15□□□□□ -0.3
SF1-201ENST00000227503 FUZQ9BT04 418 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 CD93Q9NPY3 652 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 TEX10Q9NXF1 929 aaPredicted RBP13.15□□□□□ -0.3
SF1-201ENST00000227503 PTTG3PQ9NZH4 202 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 PIPOXQ9P0Z9 390 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 ERVK-19Q9WJR5 959 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 RCE1Q9Y256 329 aa13.15□□□□□ -0.3
SF1-201ENST00000227503 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 TRABD2BA6NFA1 517 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 PRR23D1E9PI22 279 aaPredicted RBP13.14□□□□□ -0.31
SF1-201ENST00000227503 RGS9O75916 674 aaPredicted RBP13.14□□□□□ -0.31
SF1-201ENST00000227503 SPDEFO95238 335 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 PRR23D2P0DMB1 279 aaPredicted RBP13.14□□□□□ -0.31
SF1-201ENST00000227503 ALPPL2P10696 532 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 TYRP14679 529 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 LAG3P18627 525 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
SF1-201ENST00000227503 NPR2P20594 1047 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 RFX3P48380 749 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
SF1-201ENST00000227503 FAM74A1Q5RGS3 127 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 SLC27A4Q6P1M0 643 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 OR11G2Q8NGC1 345 aa13.14□□□□□ -0.31
SF1-201ENST00000227503 OR4Q3Q8NH05 313 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms