RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	CD70	P32970	193 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ARL6IP1	Q15041	203 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	CENPBD1	B2RD01	187 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	F2R	P25116	425 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF45	Q02386	682 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	IL20RB	Q6UXL0	311 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	MKX	Q8IYA7	352 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	GINS3	Q9BRX5	216 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672		A0A0A6YYC8	382 aa	Predicted RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672		H3BSA7	217 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672		H7C1Q1	480 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672		I3L1I5	382 aa	Predicted RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	CLIC3	O95833	236 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	IGHE	P01854	428 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	CD6	P30203	668 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	PBX1	P40424	430 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ATP4B	P51164	291 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	DIO3	P55073	304 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ASCC1	Q8N9N2	400 aa	Known RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	LMF2	Q9BU23	707 aa	Known RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	EMC9	Q9Y3B6	208 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLIT2	O94813	1529 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLC9B1P1	A6NJY1	282 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	BMP1	P13497	986 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	MAP2K3	P46734	347 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ACBD4	Q8NC06	268 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	DPH1	Q9BZG8	443 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	LRIT1	Q9P2V4	623 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SEC14L2	O76054	403 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	CD1D	P15813	335 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SERPINA2	P20848	420 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	STT3A	P46977	705 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SMAD2	Q15796	467 aa	Known RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLC22A6	Q4U2R8	563 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	EXOSC6	Q5RKV6	272 aa	Known RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	OR5D14	Q8NGL3	314 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SAMD8	Q96LT4	415 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	KIDINS220	Q9ULH0	1771 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	NFKBIE	O00221	500 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	CRYZL1	O95825	349 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	HTR3A	P46098	478 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	SIRPA	P78324	504 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ESX1	Q8N693	406 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	IQCF1	Q8N6M8	205 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	OR2A12	Q8NGT7	310 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	UPRT	Q96BW1	309 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	IMP4	Q96G21	291 aa	Known RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	COQ4	Q9Y3A0	265 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672		A0A1W2PQ09	198 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	PIR	O00625	290 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	HTRA2	O43464	458 aa	Predicted RBP	13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	PRPH2	P23942	346 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	MTNR1A	P48039	350 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	TMEM45A	Q9NWC5	275 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	LDB3	O75112	727 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF182	P17025	639 aa	Predicted RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	VWA5B2	Q8N398	1253 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	RTP3	Q9BQQ7	232 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	SIDT1	Q9NXL6	827 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	SIT1	Q9Y3P8	196 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	CRYM-AS1	A6NIL9	109 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	FOXE1	O00358	373 aa	Predicted RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	MAP4K2	Q12851	820 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	TSPAN33	Q86UF1	283 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	STT3B	Q8TCJ2	826 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZUFSP	Q96AP4	578 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	MRGPRX2	Q96LB1	330 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	RETREG1	Q9H6L5	497 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	SDK1	Q7Z5N4	2213 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	NOTO	A8MTQ0	251 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	SCAF4	O95104	1147 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	DCN	P07585	359 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	ICAM2	P13598	275 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	UCN3	Q969E3	161 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	TMEM19	Q96HH6	336 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	PLCXD1	Q9NUJ7	323 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672		E9PI62	339 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZFAND5	O76080	213 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	GSTP1	P09211	210 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	OR5AR1	Q8NGP9	310 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	USP36	Q9P275	1121 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	PDE4DIP	Q5VU43	2346 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	TEX19	Q8NA77	164 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	OR1J4	Q8NGS1	313 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	CNOT9	Q92600	299 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	ASF1B	Q9NVP2	202 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	STEAP1	Q9UHE8	339 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	SOBP	A7XYQ1	873 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	TUSC2	O75896	110 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	BPI	P17213	487 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	CEBPB	P17676	345 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	TACR3	P29371	465 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	RPS18	P62269	152 aa	Known RBP	13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	PIGF	Q07326	219 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	SPHAR	Q15513	63 aa		13.09	□□□□□ -0.31
NRXN1-222	ENST00000625672	HEPHL1	Q6MZM0	1159 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms