RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TRMT10AQ8TBZ6 339 aaKnown RBP15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ASB11Q8WXH4 323 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 ADAMTS14Q8WXS8 1223 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 GSDMCQ9BYG8 508 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 TMEM38AQ9H6F2 299 aa15.24■□□□□ 0.03
LINC00554-201ENST00000564841 KRBOX1C9JBD0 128 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 IFNA14P01570 189 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 SRPRAP08240 638 aaKnown RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 ACSL1P33121 698 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 TAS2R50P59544 299 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 ZNF630Q2M218 657 aaPredicted RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 METTL3Q86U44 580 aaKnown RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 THOC6Q86W42 341 aaKnown RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 LRRC28Q86X40 367 aaPredicted RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 OXR1Q8N573 874 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 ABCG4Q9H172 646 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 CXorf36Q9H7Y0 433 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 NTMQ9P121 344 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 MGAT4CQ9UBM8 478 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 C5orf58C9J3I9 102 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 MID1O15344 667 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 PRODHO43272 600 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 PIP5K1CO60331 668 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 PTSQ03393 145 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 RAB40BQ12829 278 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 SLC30A6Q6NXT4 461 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 MRPL43Q8N983 215 aaKnown RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 FBXO15Q8NCQ5 510 aaPredicted RBP15.23■□□□□ 0.03
LINC00554-201ENST00000564841 OR51Q1Q8NH59 317 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 GANCQ8TET4 914 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 WNT2BQ93097 391 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 LRRC46Q96FV0 321 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 CD93Q9NPY3 652 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 PIPOXQ9P0Z9 390 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 PFDN2Q9UHV9 154 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 NUMA1Q14980 2115 aa15.23■□□□□ 0.03
LINC00554-201ENST00000564841 NOTCH4Q99466 2003 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 FAAHO00519 579 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SGTAO43765 313 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 LINC00271P0C7V0 271 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SNRPBP14678 240 aaKnown RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 PTBP1P26599 531 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 TIA1P31483 386 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 RAD52P43351 418 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 ERVK-25P63136 954 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SNTB2Q13425 540 aaKnown RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 REEP3Q6NUK4 255 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 PPCDCQ96CD2 204 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 MRPS24Q96EL2 167 aaKnown RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 REEP4Q9H6H4 257 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 PTTG3PQ9NZH4 202 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SPEGQ15772 3267 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 F5P12259 2224 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 ARRDC5A6NEK1 342 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 IGF2P01344 180 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 FGF2P09038 288 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 CDH11P55287 796 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 POLR2GP62487 172 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 EFNB1P98172 346 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 TMEM240Q5SV17 173 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SLC6A19Q695T7 634 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SZRD1Q7Z422 152 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 TMPRSS11BQ86T26 416 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 CACUL1Q86Y37 369 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 UXS1Q8NBZ7 420 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 OR13C5Q8NGS8 318 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 C20orf85Q9H1P6 137 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SLC6A15Q9H2J7 730 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 FGF20Q9NP95 211 aaPredicted RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 TDP1Q9NUW8 608 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 RPS6KB2Q9UBS0 482 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 A4GNTQ9UNA3 340 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 CSNK1G3Q9Y6M4 447 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 A0A1W2PRB8 838 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 PLSCR5A0PG75 271 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 LINC00587B1AMM8 73 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 ANHXE9PGG2 379 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 LDOC1O95751 146 aaPredicted RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 OLFM2O95897 454 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 PTHLHP12272 177 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 TYRP14679 529 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 HLXQ14774 488 aaPredicted RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 SLC25A25Q6KCM7 469 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 HTR3DQ70Z44 454 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 FANK1Q8TC84 345 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 DPYSL5Q9BPU6 564 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 ADAT1Q9BUB4 502 aaKnown RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 ING1Q9UK53 422 aaPredicted RBP15.22■□□□□ 0.03
LINC00554-201ENST00000564841 ASB4Q9Y574 426 aa15.22■□□□□ 0.03
LINC00554-201ENST00000564841 E9PI62 339 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 FRS3O43559 492 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 SELENOFO60613 162 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 EFCAB14O75071 495 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 ZNF821O75541 412 aaPredicted RBP15.21■□□□□ 0.03
LINC00554-201ENST00000564841 IGSF6O95976 241 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 ASMTP46597 345 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 RFX3P48380 749 aa15.21■□□□□ 0.03
LINC00554-201ENST00000564841 UBE2MP61081 183 aaKnown RBP15.21■□□□□ 0.03
LINC00554-201ENST00000564841 HTR4Q13639 388 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms