RNA–Protein interactions for RNA: ENST00000552550.5

PXN-219, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-219ENST00000552550 CCDC91Q7Z6B0 441 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 EXOC3L1Q86VI1 746 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 TMEM151AQ8N4L1 468 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 OR4C3Q8NH37 302 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 RNF128Q8TEB7 428 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 ZNF483Q8TF39 744 aaPredicted RBP13.16□□□□□ -0.3
PXN-219ENST00000552550 C16orf78Q8WTQ4 265 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 MRRFQ96E11 262 aaKnown RBP13.16□□□□□ -0.3
PXN-219ENST00000552550 APIPQ96GX9 242 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 RNF145Q96MT1 663 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 ERP44Q9BS26 406 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 SRXN1Q9BYN0 137 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 AMBRA1Q9C0C7 1298 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 NPAP1Q9NZP6 1156 aa13.16□□□□□ -0.3
PXN-219ENST00000552550 A0A087WV62 115 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 A0A1W2PRB8 838 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 CCDC188H7C350 402 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 PCDH7O60245 1069 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 OR4F21O95013 312 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 JUNP05412 331 aaKnown RBP13.15□□□□□ -0.3
PXN-219ENST00000552550 COL6A2P12110 1019 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 ZNF16P17020 682 aaPredicted RBP13.15□□□□□ -0.3
PXN-219ENST00000552550 IL32P24001 234 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 MPIP34949 423 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 MAGEA4P43358 317 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 RFX3P48380 749 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 NUDT6P53370 316 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 P2RY6Q15077 328 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 ZNF239Q16600 458 aaKnown RBP13.15□□□□□ -0.3
PXN-219ENST00000552550 NRF1Q16656 503 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 PLPPR5Q32ZL2 321 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 UBAP2Q5T6F2 1119 aaKnown RBP13.15□□□□□ -0.3
PXN-219ENST00000552550 CPTPQ5TA50 214 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 TMEM107Q6UX40 140 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 OR2L13Q8N349 312 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 CEP112Q8N8E3 955 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 LMF2Q9BU23 707 aaKnown RBP13.15□□□□□ -0.3
PXN-219ENST00000552550 CACNG6Q9BXT2 260 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 TBL1XR1Q9BZK7 514 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 VPS11Q9H270 941 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 ALG2Q9H553 416 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 NGBQ9NPG2 151 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 MED17Q9NVC6 651 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 LPAR3Q9UBY5 353 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 ING1Q9UK53 422 aaPredicted RBP13.15□□□□□ -0.3
PXN-219ENST00000552550 SNX6Q9UNH7 406 aa13.15□□□□□ -0.3
PXN-219ENST00000552550 C7orf72A4D263 438 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 E7EQL1 145 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 MANBAO00462 879 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 LMX1BO60663 402 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 COQ9O75208 318 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 TYK2P29597 1187 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 MAP3K8P41279 467 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
PXN-219ENST00000552550 CARD18P57730 90 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 ITGADQ13349 1161 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 NAB1Q13506 487 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 CYB5R2Q6BCY4 276 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 KLC3Q6P597 504 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 SAMD14Q8IZD0 417 aaPredicted RBP13.14□□□□□ -0.31
PXN-219ENST00000552550 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 PIK3R3Q92569 461 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 KISS1RQ969F8 398 aaPredicted RBP13.14□□□□□ -0.31
PXN-219ENST00000552550 ELP4Q96EB1 424 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 ACPTQ9BZG2 426 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 GLIPR2Q9H4G4 154 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 Q9N2J8 555 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 KLHL13Q9P2N7 655 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 SNX8Q9Y5X2 465 aa13.14□□□□□ -0.31
PXN-219ENST00000552550 A0A087WZY1 265 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GOLGA8QA0A0J9YX86 632 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GOLGA8OA6NCC3 632 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 ALG1L2C9J202 215 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GOLGA8NF8WBI6 632 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GOLGA8RI6L899 631 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 ABCD4O14678 606 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 OTCP00480 354 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 STX2P32856 288 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 TTKP33981 857 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GABRA3P34903 492 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 HSD17B3P37058 310 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 MAGEA12P43365 314 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 HTR6P50406 440 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 NCBP2P52298 156 aaKnown RBP eCLIP13.13□□□□□ -0.31
PXN-219ENST00000552550 MANFP55145 182 aaKnown RBP13.13□□□□□ -0.31
PXN-219ENST00000552550 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 CALCOCO2Q13137 446 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 HEPACAMQ14CZ8 416 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GTF2IRD2BQ6EKJ0 949 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 CLEC2AQ6UVW9 174 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 ZDHHC24Q6UX98 284 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 BHLHA15Q7RTS1 189 aaPredicted RBP13.13□□□□□ -0.31
PXN-219ENST00000552550 ZAR1Q86SH2 424 aa13.13□□□□□ -0.31
PXN-219ENST00000552550 GTF2IRD2Q86UP8 949 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms