RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SDF2Q99470 211 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 EBF4Q9BQW3 602 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 INPP5KQ9BT40 448 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 CCDC28BQ9BUN5 200 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 OR51I1Q9H343 314 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 CHST11Q9NPF2 352 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 SDR39U1Q9NRG7 319 aaPredicted RBP11.62□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF446Q9NWS9 450 aa11.62□□□□□ -0.55
HSPG2-213ENST00000498495 FLNCQ14315 2725 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 IGLV3-32A0A0A0MS00 114 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 A0A1W2PQD3 144 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 B4DXG7 233 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 H3BNH8 94 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 RFXANKO14593 260 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 AK1P00568 194 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 GSNP06396 782 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 OR12D1P0DN82 309 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 CPN1P15169 458 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 CHRNB4P30926 498 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 DCTP40126 519 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 ZFP36L2P47974 494 aaKnown RBP11.61□□□□□ -0.55
HSPG2-213ENST00000498495 POLR2JP52435 117 aaKnown RBP11.61□□□□□ -0.55
HSPG2-213ENST00000498495 ATP12AP54707 1039 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 GFRA1P56159 465 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 RCAN2Q14206 197 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 CDSNQ15517 529 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 ARHGAP11BQ3KRB8 267 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-213ENST00000498495 FLYWCH1Q4VC44 716 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 HSP90B2PQ58FF3 399 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 DCST1Q5T197 706 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 RAET1LQ5VY80 246 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 SAXO2Q658L1 398 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 C16orf62Q7Z3J2 963 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 CCDC71Q8IV32 467 aaPredicted RBP11.61□□□□□ -0.55
HSPG2-213ENST00000498495 ARFGAP2Q8N6H7 521 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 LILRB4Q8NHJ6 448 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 PHOSPHO1Q8TCT1 267 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 ZPLD1Q8TCW7 415 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 MIPOL1Q8TD10 442 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 NEURL3Q96EH8 262 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 C1GALT1C1Q96EU7 318 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 TRIB1Q96RU8 372 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 SERHL2Q9H4I8 314 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 RMND5AQ9H871 391 aa11.61□□□□□ -0.55
HSPG2-213ENST00000498495 ICE1Q9Y2F5 2266 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 NPIPA5A0A0B4J1W7 369 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 NPIPA7E9PJI5 369 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 LINC01387J3KSC0 135 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 GTPBP1O00178 669 aaKnown RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 STX11O75558 287 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 ANP32DO95626 131 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 NPIPA8P0DM63 369 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 PEPDP12955 493 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 GRNP28799 593 aaKnown RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 CDKN2CP42773 168 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 GPR68Q15743 365 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 RIPPLY2Q5TAB7 128 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 TNFAIP8L2Q6P589 184 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF614Q8N883 585 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 CHDHQ8NE62 594 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 OR9I1Q8NGQ6 314 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 B4GALNT2Q8NHY0 566 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 RAB8BQ92930 207 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 SH3YL1Q96HL8 342 aaPredicted RBP11.6□□□□□ -0.55
HSPG2-213ENST00000498495 PIGQQ9BRB3 760 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 CALHM2Q9HA72 323 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 KCNJ16Q9NPI9 418 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 DTNAQ9Y4J8 743 aa11.6□□□□□ -0.55
HSPG2-213ENST00000498495 A0A0G2JNJ9 132 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 FAM234BA2RU67 622 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 HSPB2A8KAH6 182 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 H0Y3Z8 333 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 HCRTR2O43614 444 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 FCMRO60667 390 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 EDF1O60869 148 aaKnown RBP11.59□□□□□ -0.55
HSPG2-213ENST00000498495 KRT75O95678 551 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 IL2RAP01589 272 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 TIMP3P35625 211 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 ADH7P40394 386 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 KHKP50053 298 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 LHX2P50458 406 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 ANXA11P50995 505 aaKnown RBP11.59□□□□□ -0.55
HSPG2-213ENST00000498495 B3GALT5-AS1P59052 145 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 HSPB2Q16082 182 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 BCL2A1Q16548 175 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 ACSF3Q4G176 576 aaPredicted RBP11.59□□□□□ -0.55
HSPG2-213ENST00000498495 KLHL26Q53HC5 615 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 NSUN5P2Q63ZY6 315 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 ZNF787Q6DD87 383 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 HEPHL1Q6MZM0 1159 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 ARSKQ6UWY0 536 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 MSANTD1Q6ZTZ1 278 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 CHMP1BQ7LBR1 199 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 RNF130Q86XS8 419 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 LACC1Q8IV20 430 aa11.59□□□□□ -0.55
HSPG2-213ENST00000498495 OR5M1Q8NGP8 315 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms