RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 HMGN4O00479 90 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CCL21O00585 134 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 SLC22A2O15244 555 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CCDC22O60826 627 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 ACTL6AO96019 429 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 HOXD4P09016 255 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-211ENST00000443563 GABRA1P14867 456 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 DPP4P27487 766 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 LSP1P33241 339 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CASP9P55211 416 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 STX5Q13190 355 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 GPR68Q15743 365 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 C3AR1Q16581 482 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF630Q2M218 657 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-211ENST00000443563 GLYR1Q49A26 553 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-211ENST00000443563 KLHL26Q53HC5 615 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 NHSL2Q5HYW2 709 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 AP1ARQ63HQ0 302 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 OR5M10Q6IEU7 315 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 AAGABQ6PD74 315 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 ENPP6Q6UWR7 440 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CLEC18BQ6UXF7 455 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 LRRC74BQ6ZQY2 392 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 SPATA21Q7Z572 469 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 FGD2Q7Z6J4 655 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 ZAR1Q86SH2 424 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CD163Q86VB7 1156 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 IFNEQ86WN2 208 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CHERPQ8IWX8 916 aaKnown RBP9.86□□□□□ -0.83
HDAC6-211ENST00000443563 PM20D2Q8IYS1 436 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 CLEC18CQ8NCF0 446 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 OR2M3Q8NG83 312 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 PNPT1Q8TCS8 783 aaKnown RBP9.86□□□□□ -0.83
HDAC6-211ENST00000443563 PHOSPHO1Q8TCT1 267 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 SSC4DQ8WTU2 575 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 C10orf82Q8WW14 230 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 RAB8BQ92930 207 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 OR2B2Q9GZK3 357 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF350Q9GZX5 532 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 SAP130Q9H0E3 1048 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 SLC6A15Q9H2J7 730 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 DSN1Q9H410 356 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 TAS2R10Q9NYW0 307 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 MED11Q9P086 117 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 DTNAQ9Y4J8 743 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 LIPGQ9Y5X9 500 aa9.86□□□□□ -0.83
HDAC6-211ENST00000443563 FREM3P0C091 2139 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 BBIP1A8MTZ0 92 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 E9PLN8 166 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 NPIPB9F8W1W9 429 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 KIAA0513O60268 411 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 WDR1O75083 606 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 NPPAP01160 153 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 NR2F1P10589 423 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 HK1P19367 917 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 CHMP24386 653 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 PTGER4P35408 488 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 ADH7P40394 386 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 DSTNP60981 165 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 GNGT1P63211 74 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 SF3A3Q12874 501 aaKnown RBP eCLIP9.85□□□□□ -0.835e-7■■■■□ 23.7
HDAC6-211ENST00000443563 KLF10Q13118 480 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF141Q15928 474 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 GXYLT1Q4G148 440 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 EIPR1Q53HC9 387 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 COQ5Q5HYK3 327 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 PAGE3Q5JUK9 113 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 WIPI1Q5MNZ9 446 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-211ENST00000443563 COX20Q5RI15 118 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC6-211ENST00000443563 TMEM211Q6ICI0 200 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 APOOLQ6UXV4 268 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 YRDCQ86U90 279 aaKnown RBP9.85□□□□□ -0.83
HDAC6-211ENST00000443563 FJX1Q86VR8 437 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 DOLPP1Q86YN1 238 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF619Q8N2I2 560 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 DPP10Q8N608 796 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF614Q8N883 585 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 B4GALNT2Q8NHY0 566 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 ABTB1Q969K4 478 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-211ENST00000443563 C1GALT1C1Q96EU7 318 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 VKORC1Q9BQB6 163 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 MTHFD2LQ9H903 347 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-211ENST00000443563 CACYBPQ9HB71 228 aaKnown RBP9.85□□□□□ -0.83
HDAC6-211ENST00000443563 SAR1AQ9NR31 198 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 SLC6A13Q9NSD5 602 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 STOML1Q9UBI4 398 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 SH3BGRL2Q9UJC5 107 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 TINAGQ9UJW2 476 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 FBXL2Q9UKC9 423 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 MKLN1Q9UL63 735 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 SLC35A3Q9Y2D2 325 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 GMEB1Q9Y692 573 aa9.85□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF407Q9C0G0 2248 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SERINC4A6NH21 518 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 AHRRA9YTQ3 701 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ADAM10O14672 748 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF264O43296 627 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 HCRTR2O43614 444 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 EIF4E2O60573 245 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms