RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KIAA0100Q14667 2235 aaKnown RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 TRBV23OR9-2A0A075B6M9 112 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 A0A0J9YY10 115 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 FAM86C2PA6NEL3 165 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 OR5K4A6NMS3 321 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 H0YGG7 62 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 CASKO14936 926 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 POLR1CO15160 346 aaPredicted RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 LINC01565O15544 149 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 PIP5K1CO60331 668 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 HCN1O60741 890 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 CTSVO60911 334 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 TMCC2O75069 709 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 COQ9O75208 318 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 CCNKO75909 580 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 CH25HO95992 272 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 EGFP01133 1207 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 TNFP01375 233 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 NT5EP21589 574 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 PAICSP22234 425 aaKnown RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 GCGRP47871 477 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 ARF3P61204 181 aaPredicted RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 FABP5Q01469 135 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 HYAL1Q12794 435 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 GPR18Q14330 331 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 OR1Q1Q15612 314 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 ZSWIM7Q19AV6 140 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 TRMT12Q53H54 448 aaKnown RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 RSBN1Q5VWQ0 802 aaPredicted RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 KIAA1324Q6UXG2 1013 aaKnown RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 ZNF517Q6ZMY9 492 aaPredicted RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 RNF44Q7L0R7 432 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 MEPCEQ7L2J0 689 aaKnown RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 LHFPL3Q86UP9 236 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 C11orf74Q86VG3 221 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 MARCH9Q86YJ5 346 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 GALNT12Q8IXK2 581 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 CELF2-AS1Q8N7Q2 184 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 OR10G6Q8NH81 332 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 BAHD1Q8TBE0 780 aaPredicted RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 FANK1Q8TC84 345 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 TMEM239Q8WW34 195 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 SECISBP2Q96T21 854 aaKnown RBP9.7□□□□□ -0.86
CD44-210ENST00000434472 PRSS27Q9BQR3 290 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 PBX4Q9BYU1 374 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 HOXD1Q9GZZ0 328 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 TMEM168Q9H0V1 697 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 NKX2-4Q9H2Z4 354 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 UBQLN3Q9H347 655 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 IL21RQ9HBE5 538 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 TMEM27Q9HBJ8 222 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 ADAP2Q9NPF8 381 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 NTNG1Q9Y2I2 539 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 KIR2DS5A0A0G2JLQ3 304 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 A0A0G2JNG1 304 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 KIR2DS3K7RE56 304 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 SLC19A2O60779 497 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 APOL3O95236 402 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 CTHP32929 405 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 RAB38P57729 211 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 ZNF155Q12901 538 aaPredicted RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 KIR2DS5Q14953 304 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 TRAM1Q15629 374 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 BAK1Q16611 211 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 ALG11Q2TAA5 492 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 AMZ1Q400G9 498 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 PYDC2Q56P42 97 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 EOGTQ5NDL2 527 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 LCN1P1Q5VSP4 162 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 ZNF613Q6PF04 617 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 ZNF322Q6U7Q0 402 aaPredicted RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 TMPRSS11FQ6ZWK6 438 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 SHFQ7M4L6 423 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 NRARPQ7Z6K4 114 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 CPOQ8IVL8 374 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 ACBD7Q8N6N7 88 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 OR4F15Q8NGB8 312 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 CCL4L1Q8NHW4 92 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 DNAJA4Q8WW22 397 aaPredicted RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 SPRYD4Q8WW59 207 aaPredicted RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 ACOT12Q8WYK0 555 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 CTRCQ99895 268 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 GSDMCQ9BYG8 508 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 KCNN2Q9H2S1 579 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 OR52D1Q9H346 318 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 TIGARQ9NQ88 270 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 HINT3Q9NQE9 182 aaKnown RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 SIDT1Q9NXL6 827 aaKnown RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 MSRAQ9UJ68 235 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 ZNF221Q9UK13 617 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 YARS2Q9Y2Z4 477 aaKnown RBP9.69□□□□□ -0.86
CD44-210ENST00000434472 MED31Q9Y3C7 131 aa9.69□□□□□ -0.86
CD44-210ENST00000434472 A0A1W2PQ09 198 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CDHR4A6H8M9 788 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 CCDC182A6NF36 153 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 SLC22A31A6NKX4 558 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 J3QRE1 110 aa9.68□□□□□ -0.86
CD44-210ENST00000434472 GABRPO00591 440 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms