RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 GANABQ14697 944 aaKnown RBP20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ACSF3Q4G176 576 aaPredicted RBP20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SAXO2Q658L1 398 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CCDC71Q8IV32 467 aaPredicted RBP20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 MIER2Q8N344 545 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 OR9I1Q8NGQ6 314 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 WDYHV1Q96HA8 205 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 PANX1Q96RD7 426 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 INPP5KQ9BT40 448 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 OR51I1Q9H343 314 aa20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 MRPS18CQ9Y3D5 142 aaKnown RBP20.26■□□□□ 0.83
PTCHD3P2-201ENST00000424937 UQCRHLA0A096LP55 91 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 DUXAA6NLW8 204 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 AHRRA9YTQ3 701 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZIC3O60481 467 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 IL6P05231 212 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 GRNP28799 593 aaKnown RBP20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CHRNB4P30926 498 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 DCTP40126 519 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CDKN2CP42773 168 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 STX1BP61266 288 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 FLYWCH1Q4VC44 716 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RAET1LQ5VY80 246 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZNF787Q6DD87 383 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 TNFAIP8L2Q6P589 184 aaPredicted RBP20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 AAGABQ6PD74 315 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ENPP6Q6UWR7 440 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 TRIML2Q8N7C3 387 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 GOT1L1Q8NHS2 421 aaPredicted RBP20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ASB5Q8WWX0 329 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 NEURL3Q96EH8 262 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 C1GALT1C1Q96EU7 318 aa20.25■□□□□ 0.83
PTCHD3P2-201ENST00000424937 IGLV3-32A0A0A0MS00 114 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CCDC154A6NI56 674 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CYSRT1A8MQ03 144 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 KHKP50053 298 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RNF144AP50876 292 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SRYQ05066 204 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 LRRC74AQ0VAA2 488 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 TIGD2Q4W5G0 525 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 DNAJC14Q6Y2X3 702 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 C16orf62Q7Z3J2 963 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZNF614Q8N883 585 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZNF527Q8NB42 609 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 MIPOL1Q8TD10 442 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SH3YL1Q96HL8 342 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 HHATLQ9HCP6 504 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 EXD2Q9NVH0 621 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 NBPF19A0A087WUL8 3843 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 HEATR5AQ86XA9 2040 aa20.24■□□□□ 0.83
PTCHD3P2-201ENST00000424937 A0A1W2PQD3 144 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 FAM90A27PA6NNH2 459 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 KDM4EB2RXH2 506 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 H0Y3Z8 333 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 AK1P00568 194 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 GSNP06396 782 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 OR12D1P0DN82 309 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ADH7P40394 386 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZFP36L2P47974 494 aaKnown RBP20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 STARP49675 285 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 B3GALT5-AS1P59052 145 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CD226Q15762 336 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZNF630Q2M218 657 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ATAD3BQ5T9A4 648 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ZNF621Q6ZSS3 439 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 MISPQ8IVT2 679 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 INTS1Q8N201 2190 aaKnown RBP20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CHDHQ8NE62 594 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 THOC1Q96FV9 657 aaKnown RBP20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 TRIB1Q96RU8 372 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SDF2Q99470 211 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CCDC28BQ9BUN5 200 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 HOXD1Q9GZZ0 328 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 VDAC3Q9Y277 283 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 MED12LQ86YW9 2145 aa20.23■□□□□ 0.83
PTCHD3P2-201ENST00000424937 A0A0G2JNJ9 132 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RFXANKO14593 260 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 C1QCP02747 245 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CHMP24386 653 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 LHX2P50458 406 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 POLR2JP52435 117 aaKnown RBP20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ATP12AP54707 1039 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RCAN2Q14206 197 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SF3B4Q15427 424 aaKnown RBP eCLIP20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ARSKQ6UWY0 536 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 SEM1Q6ZVN7 128 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 OLIG3Q7RTU3 272 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RNF130Q86XS8 419 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 LACC1Q8IV20 430 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 OR5M1Q8NGP8 315 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 PHOSPHO1Q8TCT1 267 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 RAB8BQ92930 207 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 Q9UFV3 132 aa20.22■□□□□ 0.83
PTCHD3P2-201ENST00000424937 FAM47E-STBD1D6RA91 191 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 EPPINO95925 133 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 AGR2O95994 175 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 CPN1P15169 458 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 GPR68Q15743 365 aa20.21■□□□□ 0.83
PTCHD3P2-201ENST00000424937 ARHGAP11BQ3KRB8 267 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms