RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 NCDNQ9UBB6 729 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ENOPH1Q9UHY7 261 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 MRTO4Q9UKD2 239 aaKnown RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 TEX51A0A1B0GUA7 166 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 DPPA5A6NC42 116 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 FRG2CA6NGY1 282 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 VSTM2BA6NLU5 285 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 C9J4A7 227 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CNOT3O75175 753 aaKnown RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 BCAS1O75363 584 aaPredicted RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 REM1O75628 298 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 RFPL3O75679 317 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 OR5F1O95221 314 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ONECUT2O95948 504 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ADAP00813 363 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 GUSBP08236 651 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 DRD5P21918 477 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 KRT20P35900 424 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ZNF136P52737 540 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 DCAF7P61962 342 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 CD47Q08722 323 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 OR1Q1Q15612 314 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 DCAF12Q5T6F0 453 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 PGBD2Q6P3X8 592 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 KLHL17Q6TDP4 642 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 GDF7Q7Z4P5 450 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 LINC00471Q8N535 108 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 AMER2Q8N7J2 671 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 GALNT6Q8NCL4 622 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 OR4K5Q8NGD3 323 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 DIO2Q92813 273 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ADIPOR1Q96A54 375 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 ARSGQ96EG1 525 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 SPSB2Q99619 263 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 MESP1Q9BRJ9 268 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 FUZQ9BT04 418 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 GABARAPL3Q9BY60 117 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 MRPS26Q9BYN8 205 aaKnown RBP7.98□□□□□ -1.13
TDP1-203ENST00000393454 WWTR1Q9GZV5 400 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 SLC7A7Q9UM01 511 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 PCDHGA10Q9Y5H3 936 aa7.98□□□□□ -1.13
TDP1-203ENST00000393454 OR6C76A6NM76 312 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 B4E171 279 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 H3BN98 237 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 CBFA2T3O75081 653 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 NTN1O95631 604 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 IL33O95760 270 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 CLPTM1O96005 669 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 SMIM18P0DKX4 95 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 EEF1B2P24534 225 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 IL12BP29460 328 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 RYKP34925 604 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 IFNGR2P38484 337 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 TSPAN7P41732 249 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 RPS6KA3P51812 740 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 CDH15P55291 814 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 ISL1P61371 349 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 INSM1Q01101 510 aaPredicted RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 FGFBP1Q14512 234 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 EBPQ15125 230 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 ZNF141Q15928 474 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.97□□□□□ -1.13
TDP1-203ENST00000393454 CTU2Q2VPK5 515 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 PAPD4Q6PIY7 484 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 RAB11FIP2Q7L804 512 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 CPEB2Q7Z5Q1 589 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 MEX3DQ86XN8 651 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 NKAIN4Q8IVV8 208 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 GATSQ8NAP1 163 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 B3GNT7Q8NFL0 401 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 OR4C3Q8NH37 302 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 CNIH3Q8TBE1 160 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 C8orf44Q96CB5 159 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 ADOQ96SZ5 270 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 LPAR4Q99677 370 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 ZNF559Q9BR84 538 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 HOXD1Q9GZZ0 328 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 POLR2J3Q9H1A7 115 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 SLC26A1Q9H2B4 701 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 LIN28AQ9H9Z2 209 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 TMEM27Q9HBJ8 222 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 RASSF1Q9NS23 344 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 FLRT3Q9NZU0 649 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 AASSQ9UDR5 926 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 C19orf25Q9UFG5 118 aaPredicted RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 PISDQ9UG56 409 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 NDRG4Q9ULP0 352 aaKnown RBP7.97□□□□□ -1.13
TDP1-203ENST00000393454 B3GALT1Q9Y5Z6 326 aa7.97□□□□□ -1.13
TDP1-203ENST00000393454 A0A087WUU8 490 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 TRAPPC13A5PLN9 417 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 SERINC4A6NH21 518 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 SAGE2PA6NJ88 616 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 TMX2-CTNND1H3BSU7 103 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 SCDO00767 359 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 CSO75390 466 aaKnown RBP7.96□□□□□ -1.13
TDP1-203ENST00000393454 UTS2O95399 124 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 SOX14O95416 240 aa7.96□□□□□ -1.13
TDP1-203ENST00000393454 CSTAP01040 98 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms