RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 P3H2Q8IVL5 708 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 RDH10Q8IZV5 341 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.5
GPC3-201ENST00000370818 COL26A1Q96A83 441 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 KLHDC7BQ96G42 594 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 AMBNQ9NP70 447 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 REV1Q9UBZ9 1251 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 CA14Q9ULX7 337 aa11.96□□□□□ -0.5
GPC3-201ENST00000370818 ZAR1LA6NP61 321 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 B4DXG7 233 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 ADAP00813 363 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 TYRP1P17643 537 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 CSTF2P33240 577 aaKnown RBP eCLIP11.95□□□□□ -0.53e-7■■■■■ 31.5
GPC3-201ENST00000370818 SOX6P35712 828 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 CSNK2BP67870 215 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 CCDC85BQ15834 202 aaPredicted RBP11.95□□□□□ -0.5
GPC3-201ENST00000370818 XKRXQ6PP77 449 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 DNAJC22Q8N4W6 341 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 FAM46DQ8NEK8 389 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 COPS4Q9BT78 406 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 SPATA5L1Q9BVQ7 753 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 ACTRT3Q9BYD9 372 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 NIPAL2Q9H841 368 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 MAN2C1Q9NTJ4 1040 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 PSORS1C1Q9UIG5 152 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 KLHL21Q9UJP4 597 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 TMCC3Q9ULS5 477 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 GON4LQ3T8J9 2241 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 A0A075B6Q4 140 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 A0A1W2PRQ8 180 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 CCDC182A6NF36 153 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 FAAHO00519 579 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 OR10H3O60404 316 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 C1QBP02746 253 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 ZNF250P15622 560 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 HLA-DMAP28067 261 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 CRISP1P54107 249 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 TBCEQ15813 527 aaPredicted RBP11.95□□□□□ -0.5
GPC3-201ENST00000370818 TIGD3Q6B0B8 471 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 MFSD12Q6NUT3 480 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 PGBD2Q6P3X8 592 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 PAMR1Q6UXH9 720 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 USP53Q70EK8 1073 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 OR2L13Q8N349 312 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 SLC16A11Q8NCK7 471 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 TMEM52Q8NDY8 209 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 OR5T3Q8NGG3 340 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 UBASH3BQ8TF42 649 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 ZDHHC1Q8WTX9 485 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 SLC35A4Q96G79 324 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 LYRM4Q9HD34 91 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 FAM60AQ9NP50 221 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 MS4A12Q9NXJ0 267 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 SLC23A1Q9UHI7 598 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 ENOPH1Q9UHY7 261 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 SLC9A8Q9Y2E8 581 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 V9GYH0 126 aa11.95□□□□□ -0.5
GPC3-201ENST00000370818 A0A1W2PQ09 198 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 LINC00862A6NCI5 91 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
GPC3-201ENST00000370818 KIAA0513O60268 411 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 FCMRO60667 390 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 WNT1P04628 370 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 CTSBP07858 339 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 CPMP14384 443 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 ZNF10P21506 573 aaPredicted RBP11.94□□□□□ -0.5
GPC3-201ENST00000370818 TLX1P31314 330 aaPredicted RBP11.94□□□□□ -0.5
GPC3-201ENST00000370818 TALDO1P37837 337 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 NUDT6P53370 316 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 LSM11P83369 360 aaKnown RBP eCLIP11.94□□□□□ -0.5
GPC3-201ENST00000370818 ID2Q02363 134 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 TEKQ02763 1124 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 TAB1Q15750 504 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 STK11Q15831 433 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 ZNF79Q15937 498 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 ARMCX4Q5H9R4 360 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 SAMD14Q8IZD0 417 aaPredicted RBP11.94□□□□□ -0.5
GPC3-201ENST00000370818 DEFB119Q8N690 84 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 GGHQ92820 318 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 FRMD6Q96NE9 622 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 MS4A4EQ96PG1 132 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 PINK1Q9BXM7 581 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 LIN7BQ9HAP6 207 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 IL21RQ9HBE5 538 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 PRDM9Q9NQV7 894 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 CLCA1A8K7I4 914 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 B4DGG1 531 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 CYR61O00622 381 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 PLD2O14939 933 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 TPST2O60704 377 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
GPC3-201ENST00000370818 ST6GAL1P15907 406 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 CFL1P23528 166 aaKnown RBP11.94□□□□□ -0.5
GPC3-201ENST00000370818 RGS6P49758 472 aa11.94□□□□□ -0.5
GPC3-201ENST00000370818 BLKP51451 505 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms