RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 GFRA1P56159 465 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 DSCR4P56555 118 aaPredicted RBP20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 FUT5Q11128 374 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 GTDC1Q4AE62 458 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 BLOC1S3Q6QNY0 202 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 DNAJC14Q6Y2X3 702 aaPredicted RBP20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 RNF130Q86XS8 419 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 GATSQ8NAP1 163 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 OR14L1PQ8NHC6 308 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 ZFP90Q8TF47 636 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 GTF2H4Q92759 462 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 PRDM14Q9GZV8 571 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 FGFR1OP2Q9NVK5 253 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 TAS2R10Q9NYW0 307 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 CCDC167Q9P0B6 97 aa20.36■□□□□ 0.85
ECHDC1-203ENST00000368291 FIGNL2A6NMB9 653 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 NDUFB5O43674 189 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 FCMRO60667 390 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 WDR1O75083 606 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 ZCCHC18P0CG32 403 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 MVDP53602 400 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 B3GALT5-AS1P59052 145 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 CDSNQ15517 529 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 KLHL26Q53HC5 615 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 MRGPRGQ86SM5 289 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 ULK2Q8IYT8 1036 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 TRIML2Q8N7C3 387 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 XAGE5Q8WWM1 108 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 ABTB1Q969K4 478 aaPredicted RBP20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 WDYHV1Q96HA8 205 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 KLHDC3Q9BQ90 382 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 SIKE1Q9BRV8 207 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 ZNF350Q9GZX5 532 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 PLEKHB1Q9UF11 243 aaPredicted RBP20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 KCNE5Q9UJ90 142 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 DKKL1Q9UK85 242 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 FLNBO75369 2602 aaKnown RBP20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 DOCK7Q96N67 2140 aa20.35■□□□□ 0.85
ECHDC1-203ENST00000368291 A0A0G2JND7 137 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 HMGN4O00479 90 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 SCDO00767 359 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 ACTL6AO96019 429 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 AK1P00568 194 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 HOXB9P17482 250 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 TCEA1P23193 301 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 ATP12AP54707 1039 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 FLYWCH1Q4VC44 716 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 COX20Q5RI15 118 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 AP1ARQ63HQ0 302 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 SLC2A7Q6PXP3 512 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 RPTNQ6XPR3 784 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 IFNEQ86WN2 208 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 EID3Q8N140 333 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 ZNF808Q8N4W9 903 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 C1GALT1C1Q96EU7 318 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 ITCHQ96J02 903 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 HOXD1Q9GZZ0 328 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 RMND5AQ9H871 391 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 EXD2Q9NVH0 621 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 RPH3AQ9Y2J0 694 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 STX11O75558 287 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 AGR2O95994 175 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 CAPN3P20807 821 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 MDH1P40925 334 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 KHKP50053 298 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 NUP107P57740 925 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 IRX1P78414 480 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 SQLEQ14534 574 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 GANABQ14697 944 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 MAMDC2Q7Z304 686 aaPredicted RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 PNPT1Q8TCS8 783 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 TTYH2Q9BSA4 534 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 NMUR2Q9GZQ4 415 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 PAIP1Q9H074 479 aaKnown RBP20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 TMEM45AQ9NWC5 275 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 ALKBH4Q9NXW9 302 aa20.34■□□□□ 0.85
ECHDC1-203ENST00000368291 CENPVL1A0A0U1RR11 272 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 KDM4EB2RXH2 506 aaPredicted RBP20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 OIP5O43482 229 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 GMFGO60234 142 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 GABRA1P14867 456 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 HPGDP15428 266 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 HK1P19367 917 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 NCF2P19878 526 aaPredicted RBP20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 RNF144AP50876 292 aaPredicted RBP20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 GPR68Q15743 365 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 AGKQ53H12 422 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 C1orf185Q5T7R7 199 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 TMEM211Q6ICI0 200 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 ARSKQ6UWY0 536 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 C16orf62Q7Z3J2 963 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 ROPN1LQ96C74 230 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 SPDL1Q96EA4 605 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 DTNBP1Q96EV8 351 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 AURKBQ96GD4 344 aaPredicted RBP20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 TMEM120AQ9BXJ8 343 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 SAP130Q9H0E3 1048 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 PTGES2Q9H7Z7 377 aa20.33■□□□□ 0.84
ECHDC1-203ENST00000368291 MKLN1Q9UL63 735 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms