RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SNNO75324 88 aaPredicted RBP9.44□□□□□ -0.9
TPM3-207ENST00000341372 VPS4BO75351 444 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 OR6B1O95007 311 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 MPIG6BO95866 241 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 JUNP05412 331 aaKnown RBP9.44□□□□□ -0.9
TPM3-207ENST00000341372 CLEC3BP05452 202 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 NT5EP21589 574 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 SOX3P41225 446 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 C2orf80Q0P641 193 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 SMU1Q2TAY7 513 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 ANKRD34AQ69YU3 496 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 OPN5Q6U736 354 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 C22orf34Q6ZV56 151 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 TICAM1Q8IUC6 712 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 TMEM156Q8N614 296 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 ST6GALNAC3Q8NDV1 305 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 SLC22A8Q8TCC7 542 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 DOK4Q8TEW6 326 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 NR4A3Q92570 626 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 ADIPOR1Q96A54 375 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 TP53INP1Q96A56 240 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 EXOSC8Q96B26 276 aaKnown RBP9.44□□□□□ -0.9
TPM3-207ENST00000341372 MAP6Q96JE9 813 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 EGLN2Q96KS0 407 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 OR10A5Q9H207 317 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 GIMAP4Q9NUV9 329 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 HPF1Q9NWY4 346 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 VPS4AQ9UN37 437 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 ENTPD4Q9Y227 616 aa9.44□□□□□ -0.9
TPM3-207ENST00000341372 KLF13Q9Y2Y9 288 aaPredicted RBP9.44□□□□□ -0.9
TPM3-207ENST00000341372 RELNP78509 3460 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 ZGRF1Q86YA3 2104 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 PTGES3LE9PB15 166 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 CBX6O95503 412 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 CRYABP02511 175 aaKnown RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 GPX3P22352 226 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 ASMTP46597 345 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 RPL14P50914 215 aaKnown RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 STX3Q13277 289 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 LTB4RQ15722 352 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 ZNF791Q3KP31 576 aaPredicted RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 C6orf136Q5SQH8 315 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 FAM111BQ6SJ93 734 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 DND1Q8IYX4 353 aaKnown RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 FAM9CQ8IZT9 166 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 C16orf52Q8NHV5 167 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 TMEM125Q96AQ2 219 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 TP63Q9H3D4 680 aaPredicted RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 SH2D2AQ9NP31 389 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 MIEF1Q9NQG6 463 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 PFDN4Q9NQP4 134 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 G6PC2Q9NQR9 355 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 ASIC5Q9NY37 505 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 CFL2Q9Y281 166 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 A0A0A6YYJ9 748 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 KLF11O14901 512 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 BCKDHAP12694 445 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 ARL3P36405 182 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 FRKP42685 505 aaPredicted RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 UQCRFS1P47985 274 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 KCNJ5P48544 419 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 GALNTL6Q49A17 601 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 ATP6AP1LQ52LC2 224 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 TRMT12Q53H54 448 aaKnown RBP9.43□□□□□ -0.9
TPM3-207ENST00000341372 FHL5Q5TD97 284 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 GPR139Q6DWJ6 353 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 RTL4Q6ZR62 310 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 MDGA2Q7Z553 956 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 GLB1L2Q8IW92 636 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 PSD4Q8NDX1 1056 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 CDC26Q8NHZ8 85 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 MTERF3Q96E29 417 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 CLMPQ9H6B4 373 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 MANSC1Q9H8J5 431 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 OLAHQ9NV23 265 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 THAP1Q9NVV9 213 aa9.43□□□□□ -0.9
TPM3-207ENST00000341372 EML6Q6ZMW3 1958 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 C2orf92A0A1B0GVN3 265 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 ANKRD65E5RJM6 399 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 PLOD2O00469 737 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 EBAG9O00559 213 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 B3GALNT1O75752 331 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 BCAS2O75934 225 aaPredicted RBP9.42□□□□□ -0.9
TPM3-207ENST00000341372 PRPS2P11908 318 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 GNLYP22749 145 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 MPIP34949 423 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 PTGER1P34995 402 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 EMDP50402 254 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 C21orf58P58505 322 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 PMP22Q01453 160 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 ZNF385BQ569K4 471 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 GKAP1Q5VSY0 366 aaPredicted RBP9.42□□□□□ -0.9
TPM3-207ENST00000341372 SIAH3Q8IW03 269 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 CCDC28AQ8IWP9 274 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 POGLUT1Q8NBL1 392 aa9.42□□□□□ -0.9
TPM3-207ENST00000341372 FAM98AQ8NCA5 519 aaKnown RBP9.42□□□□□ -0.9
TPM3-207ENST00000341372 OR9A2Q8NGT5 310 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms