RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FRMD1Q8N878 549 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 CDCA4Q9BXL8 241 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.23
PTPN9-201ENST00000306726 SEMA4GQ9NTN9 838 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 GNG8Q9UK08 70 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 ATG4BQ9Y4P1 393 aa13.65□□□□□ -0.23
PTPN9-201ENST00000306726 TRPM6Q9BX84 2022 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 A0A0A6YYJ9 748 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 TMEM229AB2RXF0 380 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ALDOBP05062 364 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 STOMP27105 288 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 OR12D2P58182 307 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 MLLT11Q13015 90 aaPredicted RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 FAM71E1Q6IPT2 247 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 FATE1Q969F0 183 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 METTL17Q9H7H0 456 aaPredicted RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 RBFOX1Q9NWB1 397 aaKnown RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 CA5BQ9Y2D0 317 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 E9PI62 339 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 LDB3O75112 727 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 CHRM4P08173 479 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 MAPK9P45984 424 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 C2orf27AQ580R0 203 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 FRRS1Q6ZNA5 592 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 COMMD7Q86VX2 200 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ANKRD53Q8N9V6 530 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF527Q8NB42 609 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 OR8D4Q8NGM9 314 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 SUSD6Q92537 303 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 TM4SF18Q96CE8 201 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 PLCXD1Q9NUJ7 323 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 CD207Q9UJ71 328 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF780BQ9Y6R6 833 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ANXA11P50995 505 aaKnown RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 CCR8P51685 355 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 RRAS2P62070 204 aaPredicted RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 DGCR2P98153 550 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ILKQ13418 452 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 METTL27Q8N6F8 245 aaPredicted RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 GDPD1Q8N9F7 314 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 SLC16A11Q8NCK7 471 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 ALG8Q9BVK2 526 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 CDV3Q9UKY7 258 aaKnown RBP13.64□□□□□ -0.23
PTPN9-201ENST00000306726 TMEM5Q9Y2B1 443 aa13.64□□□□□ -0.23
PTPN9-201ENST00000306726 PRICKLE3O43900 615 aaPredicted RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 EIF4EP06730 217 aaKnown RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 IL1RNP18510 177 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 MAZP56270 477 aaKnown RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 E2F1Q01094 437 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 RHAGQ02094 409 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF542PQ5EBM4 170 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 BEX5Q5H9J7 111 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SHISA5Q8N114 240 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF655Q8N720 491 aaPredicted RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 NUP43Q8NFH3 380 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 RGMAQ96B86 450 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 PDCD1LG2Q9BQ51 273 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SYNPO2LQ9H987 977 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SPHK2Q9NRA0 654 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 CNOT2Q9NZN8 540 aaKnown RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 HCN3Q9P1Z3 774 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 IKZF2Q9UKS7 526 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ATG2AQ2TAZ0 1938 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ACOD1A6NK06 481 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 IGFBP4P22692 258 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ACVR2AP27037 513 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 PPP3R1P63098 170 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SNTB2Q13425 540 aaKnown RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 PLPP6Q8IY26 295 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 LINC00471Q8N535 108 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 LMLNQ96KR4 655 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 C3orf14Q9HBI5 128 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 FBXL3Q9UKT7 428 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 WDR45Q9Y484 360 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 CHST10O43529 356 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 OR7A10O76100 309 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 IFNGR2P38484 337 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 RPL3P39023 403 aaKnown RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 GZMKP49863 264 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SP140Q13342 867 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 AGERQ15109 404 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 GGTA1PQ4G0N0 100 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 ZNF805Q5CZA5 627 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 MPP7Q5T2T1 576 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SLX4IPQ5VYV7 408 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 PRSS58Q8IYP2 241 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 CBARPQ8N350 705 aaPredicted RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 FBLIM1Q8WUP2 373 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 OR5P2Q8WZ92 322 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 UBE2E3Q969T4 207 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 C4orf36Q96KX1 117 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SEC22CQ9BRL7 303 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 HINT3Q9NQE9 182 aaKnown RBP13.63□□□□□ -0.23
PTPN9-201ENST00000306726 SLC35C2Q9NQQ7 365 aa13.63□□□□□ -0.23
PTPN9-201ENST00000306726 CXorf51AA0A1B0GTR3 108 aa13.62□□□□□ -0.23
PTPN9-201ENST00000306726 PRODHO43272 600 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms