RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 METTL2AQ96IZ6 378 aaKnown RBP14.06□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF559Q9BR84 538 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 AGPAT4Q9NRZ5 378 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 A6NL46 340 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 FAM72CH0Y354 149 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
SCN3B-201ENST00000299333 TMEM127O75204 238 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 HLA-AP01891 365 aaKnown RBP14.06□□□□□ -0.16
SCN3B-201ENST00000299333 ELNP15502 786 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 FLT3LGP49771 235 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 GSTM4Q03013 218 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 FAM72AQ5TYM5 149 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 FAM72DQ6L9T8 149 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 FAM72BQ86X60 149 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 HUS1BQ8NHY5 278 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 TMEM125Q96AQ2 219 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 KIAA1143Q96AT1 154 aaPredicted RBP14.06□□□□□ -0.16
SCN3B-201ENST00000299333 PRRT1Q99946 306 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 C2orf42Q9NWW7 574 aa14.06□□□□□ -0.16
SCN3B-201ENST00000299333 C20orf202A1L168 122 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 C1orf226A1L170 272 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 ACRV1P26436 265 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 TBPL1P62380 186 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 CXADRP78310 365 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 PIN1Q13526 163 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 ESCO2Q56NI9 601 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 CRTAC1Q9NQ79 661 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 C3P01024 1663 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SMLR1H3BR10 107 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 NCR1O76036 304 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 EOMESO95936 686 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SERPINE2P07093 398 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 C21orf33P30042 268 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 PSMB10P40306 273 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 CTXN1P60606 82 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RRAS2P62070 204 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 FLI1Q01543 452 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 GHRHRQ02643 423 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SPOCK1Q08629 439 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RGNQ15493 299 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 PHF19Q5T6S3 580 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SLC9B2Q86UD5 537 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 OSTM1Q86WC4 334 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 HHIPL1Q96JK4 782 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RCE1Q9Y256 329 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 A0A0B4J2A0 478 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 M0R3H8 397 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 ADAM12O43184 909 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SEC14L2O76054 403 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 HTR6P50406 440 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 MRPL49Q13405 166 aaKnown RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 DEFB134Q4QY38 66 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 NIPAL3Q6P499 406 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 MEX3DQ86XN8 651 aaKnown RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 FAM58AQ8N1B3 248 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 THAP3Q8WTV1 239 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 LINC01599Q8WXQ3 324 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SHPKQ9UHJ6 478 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 hCG_1807616A0A1W2PRN6 198 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 FABP7O15540 132 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 HOXB5P09067 269 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 ADH5P11766 374 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RPS5P46782 204 aaKnown RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RAP2BP61225 183 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SQSTM1Q13501 440 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 GPR50Q13585 617 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 RAB33AQ14088 237 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 IER5LQ5T953 404 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 METAP1DQ6UB28 335 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-201ENST00000299333 CREB3L2Q70SY1 520 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 DEFB132Q7Z7B7 95 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 ZNF461Q8TAF7 563 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 KLRG1Q96E93 195 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 SLC19A3Q9BZV2 496 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 TP53TG5Q9Y2B4 290 aa14.05□□□□□ -0.16
SCN3B-201ENST00000299333 IMPA2O14732 288 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 CPN1P15169 458 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 CRHBPP24387 322 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 MRPS10P82664 201 aaKnown RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 PSAPL1Q6NUJ1 521 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 LYPD4Q6UWN0 246 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ASPGQ86U10 573 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ENTHD1Q8IYW4 607 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 DEFB118Q96PH6 123 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SMOQ99835 787 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 RNF32Q9H0A6 362 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 TO15178 435 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 FDXRP22570 491 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 PLCXD2Q0VAA5 305 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 CLEC9AQ6UXN8 241 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ALDH16A1Q8IZ83 802 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ADGRG5Q8IZF4 528 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 RNF128Q8TEB7 428 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 RBPMSQ93062 196 aaKnown RBP14.04□□□□□ -0.16
SCN3B-201ENST00000299333 SCAMP4Q969E2 229 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 ADIPOR1Q96A54 375 aa14.04□□□□□ -0.16
SCN3B-201ENST00000299333 BSCL2Q96G97 398 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms